Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Thbs1P35441 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Thbs1P35441 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Thbs1P35441 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Thbs1P35441 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Thbs1P35441 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Thbs1P35441 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Thbs1P35441 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Thbs1P35441 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Thbs1P35441 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Thbs1P35441 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Thbs1P35441 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Thbs1P35441 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Thbs1P35441 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.21□□□□□ -0.13
Thbs1P35441 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Thbs1P35441 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Thbs1P35441 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Thbs1P35441 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Thbs1P35441 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.21□□□□□ -0.13
Thbs1P35441 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Thbs1P35441 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Thbs1P35441 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Thbs1P35441 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Thbs1P35441 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Thbs1P35441 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Thbs1P35441 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Thbs1P35441 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Thbs1P35441 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Thbs1P35441 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Thbs1P35441 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Thbs1P35441 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.21□□□□□ -0.14
Thbs1P35441 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.21□□□□□ -0.14
Thbs1P35441 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Thbs1P35441 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Thbs1P35441 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Thbs1P35441 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Thbs1P35441 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Thbs1P35441 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Thbs1P35441 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.2□□□□□ -0.14
Thbs1P35441 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.2□□□□□ -0.14
Thbs1P35441 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Thbs1P35441 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Thbs1P35441 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.2□□□□□ -0.14
Thbs1P35441 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.2□□□□□ -0.14
Thbs1P35441 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Thbs1P35441 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Thbs1P35441 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Thbs1P35441 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Thbs1P35441 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Thbs1P35441 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Thbs1P35441 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Thbs1P35441 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.2□□□□□ -0.14
Thbs1P35441 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Thbs1P35441 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Thbs1P35441 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Thbs1P35441 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.19□□□□□ -0.14
Thbs1P35441 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thbs1P35441 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.19□□□□□ -0.14
Thbs1P35441 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thbs1P35441 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thbs1P35441 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thbs1P35441 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thbs1P35441 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thbs1P35441 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Thbs1P35441 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Thbs1P35441 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thbs1P35441 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.19□□□□□ -0.14
Thbs1P35441 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.19□□□□□ -0.14
Thbs1P35441 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thbs1P35441 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Thbs1P35441 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thbs1P35441 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thbs1P35441 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Thbs1P35441 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thbs1P35441 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Thbs1P35441 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thbs1P35441 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Thbs1P35441 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thbs1P35441 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.19□□□□□ -0.14
Thbs1P35441 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thbs1P35441 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thbs1P35441 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Thbs1P35441 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thbs1P35441 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thbs1P35441 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thbs1P35441 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thbs1P35441 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thbs1P35441 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thbs1P35441 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thbs1P35441 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Thbs1P35441 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thbs1P35441 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thbs1P35441 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thbs1P35441 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thbs1P35441 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thbs1P35441 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Thbs1P35441 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Thbs1P35441 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thbs1P35441 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.18□□□□□ -0.14
Thbs1P35441 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms