Protein–RNA interactions for Protein: P31240

Pdgfb, Platelet-derived growth factor subunit B, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfbP31240 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
PdgfbP31240 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PdgfbP31240 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PdgfbP31240 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
PdgfbP31240 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PdgfbP31240 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PdgfbP31240 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PdgfbP31240 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PdgfbP31240 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PdgfbP31240 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PdgfbP31240 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PdgfbP31240 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PdgfbP31240 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.33■□□□□ 0.04
PdgfbP31240 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
PdgfbP31240 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PdgfbP31240 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PdgfbP31240 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PdgfbP31240 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PdgfbP31240 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PdgfbP31240 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PdgfbP31240 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PdgfbP31240 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PdgfbP31240 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
PdgfbP31240 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
PdgfbP31240 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PdgfbP31240 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
PdgfbP31240 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PdgfbP31240 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC15.32■□□□□ 0.04
PdgfbP31240 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
PdgfbP31240 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PdgfbP31240 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PdgfbP31240 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC15.32■□□□□ 0.04
PdgfbP31240 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC15.32■□□□□ 0.04
PdgfbP31240 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC15.32■□□□□ 0.04
PdgfbP31240 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PdgfbP31240 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PdgfbP31240 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PdgfbP31240 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PdgfbP31240 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PdgfbP31240 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
PdgfbP31240 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PdgfbP31240 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.32■□□□□ 0.04
PdgfbP31240 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PdgfbP31240 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
PdgfbP31240 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PdgfbP31240 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PdgfbP31240 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PdgfbP31240 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PdgfbP31240 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PdgfbP31240 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PdgfbP31240 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PdgfbP31240 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PdgfbP31240 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PdgfbP31240 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PdgfbP31240 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PdgfbP31240 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PdgfbP31240 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PdgfbP31240 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC15.31■□□□□ 0.04
PdgfbP31240 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PdgfbP31240 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PdgfbP31240 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PdgfbP31240 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PdgfbP31240 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC15.31■□□□□ 0.04
PdgfbP31240 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PdgfbP31240 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PdgfbP31240 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PdgfbP31240 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PdgfbP31240 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.31■□□□□ 0.04
PdgfbP31240 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PdgfbP31240 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PdgfbP31240 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PdgfbP31240 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
PdgfbP31240 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PdgfbP31240 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PdgfbP31240 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PdgfbP31240 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PdgfbP31240 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PdgfbP31240 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC15.3■□□□□ 0.04
PdgfbP31240 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC15.3■□□□□ 0.04
PdgfbP31240 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.3■□□□□ 0.04
PdgfbP31240 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC15.3■□□□□ 0.04
PdgfbP31240 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC15.3■□□□□ 0.04
PdgfbP31240 Gm23984-201ENSMUST00000157139 203 ntBASIC15.3■□□□□ 0.04
PdgfbP31240 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PdgfbP31240 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PdgfbP31240 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
PdgfbP31240 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.3■□□□□ 0.04
PdgfbP31240 Gm6745-201ENSMUST00000199216 526 ntBASIC15.3■□□□□ 0.04
PdgfbP31240 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.3■□□□□ 0.04
PdgfbP31240 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PdgfbP31240 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PdgfbP31240 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PdgfbP31240 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PdgfbP31240 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PdgfbP31240 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PdgfbP31240 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
PdgfbP31240 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PdgfbP31240 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PdgfbP31240 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PdgfbP31240 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms