Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Nedd8P29595 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.28□□□□□ -0.12
Nedd8P29595 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nedd8P29595 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nedd8P29595 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC14.28□□□□□ -0.12
Nedd8P29595 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nedd8P29595 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nedd8P29595 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC14.28□□□□□ -0.12
Nedd8P29595 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nedd8P29595 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.28□□□□□ -0.12
Nedd8P29595 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nedd8P29595 Gm44450-201ENSMUST00000199528 114 ntBASIC14.28□□□□□ -0.12
Nedd8P29595 Gm18421-201ENSMUST00000204122 625 ntBASIC14.28□□□□□ -0.12
Nedd8P29595 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nedd8P29595 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.28□□□□□ -0.12
Nedd8P29595 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nedd8P29595 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Nedd8P29595 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nedd8P29595 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nedd8P29595 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nedd8P29595 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nedd8P29595 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nedd8P29595 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Nedd8P29595 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Nedd8P29595 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nedd8P29595 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nedd8P29595 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nedd8P29595 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Nedd8P29595 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nedd8P29595 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nedd8P29595 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Nedd8P29595 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.27□□□□□ -0.12
Nedd8P29595 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nedd8P29595 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nedd8P29595 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
Nedd8P29595 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nedd8P29595 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nedd8P29595 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nedd8P29595 Gm5874-201ENSMUST00000096101 508 ntBASIC14.27□□□□□ -0.13
Nedd8P29595 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Nedd8P29595 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nedd8P29595 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nedd8P29595 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
Nedd8P29595 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nedd8P29595 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.27□□□□□ -0.13
Nedd8P29595 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
Nedd8P29595 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nedd8P29595 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nedd8P29595 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Nedd8P29595 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nedd8P29595 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nedd8P29595 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nedd8P29595 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nedd8P29595 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nedd8P29595 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Nedd8P29595 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nedd8P29595 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.26□□□□□ -0.13
Nedd8P29595 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nedd8P29595 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nedd8P29595 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nedd8P29595 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.26□□□□□ -0.13
Nedd8P29595 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.26□□□□□ -0.13
Nedd8P29595 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Nedd8P29595 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nedd8P29595 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nedd8P29595 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nedd8P29595 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nedd8P29595 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.26□□□□□ -0.13
Nedd8P29595 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nedd8P29595 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Nedd8P29595 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nedd8P29595 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nedd8P29595 Gm38027-201ENSMUST00000192315 235 ntBASIC14.26□□□□□ -0.13
Nedd8P29595 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC14.26□□□□□ -0.13
Nedd8P29595 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nedd8P29595 Gm7791-201ENSMUST00000219066 539 ntBASIC14.26□□□□□ -0.13
Nedd8P29595 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Nedd8P29595 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nedd8P29595 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nedd8P29595 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nedd8P29595 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nedd8P29595 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Nedd8P29595 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nedd8P29595 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nedd8P29595 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nedd8P29595 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nedd8P29595 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nedd8P29595 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Nedd8P29595 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nedd8P29595 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nedd8P29595 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nedd8P29595 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Nedd8P29595 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nedd8P29595 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nedd8P29595 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nedd8P29595 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.25□□□□□ -0.13
Nedd8P29595 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nedd8P29595 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nedd8P29595 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nedd8P29595 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms