Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm4691-201ENSMUST00000182339 1000 ntBASIC17.29■□□□□ 0.36
Col2a1P28481 Gm27430-201ENSMUST00000184585 107 ntBASIC17.29■□□□□ 0.36
Col2a1P28481 Gm28630-201ENSMUST00000187806 498 ntBASIC17.29■□□□□ 0.36
Col2a1P28481 Gm44333-201ENSMUST00000197168 107 ntBASIC17.29■□□□□ 0.36
Col2a1P28481 Gm2451-201ENSMUST00000199447 999 ntBASIC17.29■□□□□ 0.36
Col2a1P28481 Gm10290-201ENSMUST00000200451 999 ntBASIC17.29■□□□□ 0.36
Col2a1P28481 Gm18049-201ENSMUST00000208909 581 ntBASIC17.29■□□□□ 0.36
Col2a1P28481 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC17.29■□□□□ 0.36
Col2a1P28481 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col2a1P28481 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col2a1P28481 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col2a1P28481 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col2a1P28481 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC17.28■□□□□ 0.36
Col2a1P28481 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col2a1P28481 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col2a1P28481 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col2a1P28481 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col2a1P28481 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC17.28■□□□□ 0.36
Col2a1P28481 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC17.28■□□□□ 0.36
Col2a1P28481 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Col2a1P28481 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC17.28■□□□□ 0.36
Col2a1P28481 Rbfox2-208ENSMUST00000227930 1218 ntBASIC17.28■□□□□ 0.36
Col2a1P28481 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col2a1P28481 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col2a1P28481 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Col2a1P28481 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col2a1P28481 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col2a1P28481 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col2a1P28481 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Col2a1P28481 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col2a1P28481 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Col2a1P28481 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Col2a1P28481 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Col2a1P28481 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col2a1P28481 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col2a1P28481 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col2a1P28481 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col2a1P28481 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Col2a1P28481 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Col2a1P28481 Gm25144-201ENSMUST00000179561 110 ntBASIC17.27■□□□□ 0.36
Col2a1P28481 Gm25352-201ENSMUST00000179815 110 ntBASIC17.27■□□□□ 0.36
Col2a1P28481 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Col2a1P28481 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC17.27■□□□□ 0.36
Col2a1P28481 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col2a1P28481 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Col2a1P28481 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.27■□□□□ 0.36
Col2a1P28481 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col2a1P28481 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col2a1P28481 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col2a1P28481 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col2a1P28481 Gm42466-201ENSMUST00000202099 1301 ntBASIC17.27■□□□□ 0.35
Col2a1P28481 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
Col2a1P28481 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Col2a1P28481 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Col2a1P28481 Gm11839-201ENSMUST00000120647 1953 ntBASIC17.27■□□□□ 0.35
Col2a1P28481 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Col2a1P28481 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.27■□□□□ 0.35
Col2a1P28481 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Col2a1P28481 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC17.27■□□□□ 0.35
Col2a1P28481 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col2a1P28481 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col2a1P28481 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col2a1P28481 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col2a1P28481 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col2a1P28481 Gm6539-201ENSMUST00000119157 1064 ntBASIC17.26■□□□□ 0.35
Col2a1P28481 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Col2a1P28481 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col2a1P28481 Gm27618-201ENSMUST00000183671 60 ntBASIC17.26■□□□□ 0.35
Col2a1P28481 Gm37277-201ENSMUST00000194052 1111 ntBASIC17.26■□□□□ 0.35
Col2a1P28481 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col2a1P28481 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.26■□□□□ 0.35
Col2a1P28481 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC17.26■□□□□ 0.35
Col2a1P28481 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col2a1P28481 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.26■□□□□ 0.35
Col2a1P28481 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col2a1P28481 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col2a1P28481 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col2a1P28481 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Col2a1P28481 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col2a1P28481 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Col2a1P28481 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col2a1P28481 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col2a1P28481 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col2a1P28481 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col2a1P28481 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col2a1P28481 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col2a1P28481 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Col2a1P28481 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Col2a1P28481 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col2a1P28481 Gm14057-201ENSMUST00000120631 482 ntBASIC17.25■□□□□ 0.35
Col2a1P28481 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC17.25■□□□□ 0.35
Col2a1P28481 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col2a1P28481 Gm5479-201ENSMUST00000160578 435 ntBASIC17.25■□□□□ 0.35
Col2a1P28481 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col2a1P28481 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC17.25■□□□□ 0.35
Col2a1P28481 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Col2a1P28481 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col2a1P28481 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col2a1P28481 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col2a1P28481 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms