Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Col8a2P25318 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC12.84□□□□□ -0.35
Col8a2P25318 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col8a2P25318 Gm10175-201ENSMUST00000086013 645 ntBASIC12.84□□□□□ -0.35
Col8a2P25318 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Col8a2P25318 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col8a2P25318 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col8a2P25318 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col8a2P25318 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col8a2P25318 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col8a2P25318 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col8a2P25318 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col8a2P25318 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col8a2P25318 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Col8a2P25318 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col8a2P25318 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col8a2P25318 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Col8a2P25318 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col8a2P25318 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col8a2P25318 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
Col8a2P25318 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Col8a2P25318 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col8a2P25318 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col8a2P25318 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col8a2P25318 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col8a2P25318 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col8a2P25318 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Col8a2P25318 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col8a2P25318 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.83□□□□□ -0.36
Col8a2P25318 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col8a2P25318 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC12.83□□□□□ -0.36
Col8a2P25318 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col8a2P25318 Gm8318-201ENSMUST00000182954 872 ntBASIC12.83□□□□□ -0.36
Col8a2P25318 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col8a2P25318 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col8a2P25318 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col8a2P25318 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col8a2P25318 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col8a2P25318 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col8a2P25318 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Col8a2P25318 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col8a2P25318 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col8a2P25318 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col8a2P25318 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col8a2P25318 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col8a2P25318 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col8a2P25318 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col8a2P25318 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col8a2P25318 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col8a2P25318 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col8a2P25318 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col8a2P25318 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col8a2P25318 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col8a2P25318 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col8a2P25318 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col8a2P25318 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col8a2P25318 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col8a2P25318 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Col8a2P25318 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col8a2P25318 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col8a2P25318 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col8a2P25318 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col8a2P25318 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col8a2P25318 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Col8a2P25318 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col8a2P25318 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC12.82□□□□□ -0.36
Col8a2P25318 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col8a2P25318 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col8a2P25318 Gm18489-201ENSMUST00000172565 551 ntBASIC12.82□□□□□ -0.36
Col8a2P25318 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC12.82□□□□□ -0.36
Col8a2P25318 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.82□□□□□ -0.36
Col8a2P25318 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
Col8a2P25318 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col8a2P25318 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col8a2P25318 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col8a2P25318 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col8a2P25318 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col8a2P25318 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col8a2P25318 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col8a2P25318 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col8a2P25318 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC12.82□□□□□ -0.36
Col8a2P25318 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col8a2P25318 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Col8a2P25318 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col8a2P25318 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col8a2P25318 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col8a2P25318 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.81□□□□□ -0.36
Col8a2P25318 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Col8a2P25318 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col8a2P25318 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col8a2P25318 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col8a2P25318 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col8a2P25318 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col8a2P25318 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.81□□□□□ -0.36
Col8a2P25318 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col8a2P25318 Gm14822-201ENSMUST00000122247 291 ntBASIC12.81□□□□□ -0.36
Col8a2P25318 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col8a2P25318 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Col8a2P25318 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.81□□□□□ -0.36
Col8a2P25318 AC174742.1-201ENSMUST00000218272 304 ntBASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms