Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pde6bP23440 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pde6bP23440 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pde6bP23440 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pde6bP23440 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.79■□□□□ 0.28
Pde6bP23440 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pde6bP23440 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pde6bP23440 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pde6bP23440 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pde6bP23440 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pde6bP23440 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pde6bP23440 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Pde6bP23440 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pde6bP23440 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.79■□□□□ 0.28
Pde6bP23440 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pde6bP23440 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC16.79■□□□□ 0.28
Pde6bP23440 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Pde6bP23440 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Pde6bP23440 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pde6bP23440 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pde6bP23440 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Pde6bP23440 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pde6bP23440 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pde6bP23440 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pde6bP23440 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pde6bP23440 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Pde6bP23440 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pde6bP23440 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pde6bP23440 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Pde6bP23440 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pde6bP23440 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pde6bP23440 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pde6bP23440 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pde6bP23440 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pde6bP23440 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Pde6bP23440 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Pde6bP23440 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.78■□□□□ 0.28
Pde6bP23440 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pde6bP23440 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pde6bP23440 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Pde6bP23440 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC16.78■□□□□ 0.28
Pde6bP23440 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC16.78■□□□□ 0.28
Pde6bP23440 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pde6bP23440 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC16.78■□□□□ 0.28
Pde6bP23440 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.78■□□□□ 0.28
Pde6bP23440 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.78■□□□□ 0.28
Pde6bP23440 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pde6bP23440 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.78■□□□□ 0.28
Pde6bP23440 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.78■□□□□ 0.28
Pde6bP23440 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pde6bP23440 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pde6bP23440 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pde6bP23440 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pde6bP23440 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pde6bP23440 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pde6bP23440 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pde6bP23440 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Pde6bP23440 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pde6bP23440 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pde6bP23440 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pde6bP23440 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pde6bP23440 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pde6bP23440 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pde6bP23440 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pde6bP23440 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Pde6bP23440 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.77■□□□□ 0.28
Pde6bP23440 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pde6bP23440 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pde6bP23440 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pde6bP23440 Gm11025-201ENSMUST00000140773 466 ntBASIC16.77■□□□□ 0.28
Pde6bP23440 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pde6bP23440 Mir7036b-201ENSMUST00000184791 63 ntBASIC16.77■□□□□ 0.28
Pde6bP23440 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pde6bP23440 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pde6bP23440 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pde6bP23440 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pde6bP23440 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pde6bP23440 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pde6bP23440 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Pde6bP23440 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pde6bP23440 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Pde6bP23440 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pde6bP23440 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pde6bP23440 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Pde6bP23440 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pde6bP23440 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pde6bP23440 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Pde6bP23440 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.76■□□□□ 0.27
Pde6bP23440 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pde6bP23440 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Pde6bP23440 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pde6bP23440 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pde6bP23440 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pde6bP23440 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pde6bP23440 Gm44492-201ENSMUST00000197012 141 ntBASIC16.76■□□□□ 0.27
Pde6bP23440 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC16.76■□□□□ 0.27
Pde6bP23440 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pde6bP23440 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Pde6bP23440 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pde6bP23440 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms