Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cbx3P23198 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cbx3P23198 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cbx3P23198 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cbx3P23198 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cbx3P23198 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cbx3P23198 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cbx3P23198 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cbx3P23198 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC14.05□□□□□ -0.16
Cbx3P23198 Trmt13-210ENSMUST00000198454 880 ntBASIC14.05□□□□□ -0.16
Cbx3P23198 Gm20049-201ENSMUST00000219950 730 ntBASIC14.05□□□□□ -0.16
Cbx3P23198 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cbx3P23198 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cbx3P23198 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cbx3P23198 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cbx3P23198 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cbx3P23198 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cbx3P23198 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cbx3P23198 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.05□□□□□ -0.16
Cbx3P23198 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cbx3P23198 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.05□□□□□ -0.16
Cbx3P23198 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC14.05□□□□□ -0.16
Cbx3P23198 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cbx3P23198 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cbx3P23198 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cbx3P23198 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cbx3P23198 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cbx3P23198 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cbx3P23198 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cbx3P23198 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cbx3P23198 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cbx3P23198 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.04□□□□□ -0.16
Cbx3P23198 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC14.04□□□□□ -0.16
Cbx3P23198 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC14.04□□□□□ -0.16
Cbx3P23198 H2-K2-201ENSMUST00000174250 1049 ntBASIC14.04□□□□□ -0.16
Cbx3P23198 Gm9694-201ENSMUST00000193347 1189 ntBASIC14.04□□□□□ -0.16
Cbx3P23198 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cbx3P23198 Slc35b2-207ENSMUST00000226086 850 ntBASIC14.04□□□□□ -0.16
Cbx3P23198 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cbx3P23198 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cbx3P23198 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.04□□□□□ -0.16
Cbx3P23198 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cbx3P23198 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cbx3P23198 Nrn1-203ENSMUST00000223611 1443 ntBASIC14.04□□□□□ -0.16
Cbx3P23198 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cbx3P23198 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cbx3P23198 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.04□□□□□ -0.16
Cbx3P23198 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cbx3P23198 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cbx3P23198 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cbx3P23198 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cbx3P23198 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cbx3P23198 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.04□□□□□ -0.16
Cbx3P23198 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cbx3P23198 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cbx3P23198 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cbx3P23198 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cbx3P23198 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cbx3P23198 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cbx3P23198 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cbx3P23198 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cbx3P23198 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cbx3P23198 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Cbx3P23198 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cbx3P23198 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cbx3P23198 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cbx3P23198 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cbx3P23198 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
Cbx3P23198 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Cbx3P23198 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cbx3P23198 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cbx3P23198 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC14.03□□□□□ -0.16
Cbx3P23198 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.03□□□□□ -0.16
Cbx3P23198 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC14.03□□□□□ -0.16
Cbx3P23198 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cbx3P23198 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cbx3P23198 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cbx3P23198 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cbx3P23198 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cbx3P23198 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Cbx3P23198 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cbx3P23198 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cbx3P23198 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC14.03□□□□□ -0.16
Cbx3P23198 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cbx3P23198 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cbx3P23198 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cbx3P23198 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cbx3P23198 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cbx3P23198 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cbx3P23198 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Cbx3P23198 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cbx3P23198 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cbx3P23198 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cbx3P23198 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cbx3P23198 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cbx3P23198 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cbx3P23198 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cbx3P23198 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Cbx3P23198 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cbx3P23198 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms