Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cntn1P12960 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Cntn1P12960 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cntn1P12960 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Cntn1P12960 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cntn1P12960 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cntn1P12960 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cntn1P12960 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cntn1P12960 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cntn1P12960 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Cntn1P12960 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
Cntn1P12960 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cntn1P12960 Gm37935-201ENSMUST00000192012 982 ntBASIC14.75□□□□□ -0.05
Cntn1P12960 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Cntn1P12960 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cntn1P12960 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cntn1P12960 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cntn1P12960 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cntn1P12960 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cntn1P12960 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cntn1P12960 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Cntn1P12960 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Cntn1P12960 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cntn1P12960 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cntn1P12960 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cntn1P12960 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cntn1P12960 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Cntn1P12960 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cntn1P12960 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Cntn1P12960 App-207ENSMUST00000227737 2827 ntBASIC14.74□□□□□ -0.05
Cntn1P12960 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cntn1P12960 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cntn1P12960 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cntn1P12960 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cntn1P12960 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cntn1P12960 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cntn1P12960 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cntn1P12960 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.74□□□□□ -0.05
Cntn1P12960 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cntn1P12960 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.74□□□□□ -0.05
Cntn1P12960 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.74□□□□□ -0.05
Cntn1P12960 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.74□□□□□ -0.05
Cntn1P12960 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cntn1P12960 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.74□□□□□ -0.05
Cntn1P12960 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cntn1P12960 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cntn1P12960 Gm5867-201ENSMUST00000063197 592 ntBASIC14.74□□□□□ -0.05
Cntn1P12960 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cntn1P12960 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cntn1P12960 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cntn1P12960 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cntn1P12960 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Cntn1P12960 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cntn1P12960 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cntn1P12960 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cntn1P12960 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cntn1P12960 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cntn1P12960 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cntn1P12960 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cntn1P12960 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cntn1P12960 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cntn1P12960 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cntn1P12960 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cntn1P12960 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cntn1P12960 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cntn1P12960 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
Cntn1P12960 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cntn1P12960 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cntn1P12960 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.73□□□□□ -0.05
Cntn1P12960 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.73□□□□□ -0.05
Cntn1P12960 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.73□□□□□ -0.05
Cntn1P12960 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.73□□□□□ -0.05
Cntn1P12960 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.73□□□□□ -0.05
Cntn1P12960 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cntn1P12960 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.73□□□□□ -0.05
Cntn1P12960 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cntn1P12960 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cntn1P12960 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cntn1P12960 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cntn1P12960 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cntn1P12960 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cntn1P12960 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cntn1P12960 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cntn1P12960 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cntn1P12960 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.73□□□□□ -0.05
Cntn1P12960 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cntn1P12960 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cntn1P12960 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cntn1P12960 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cntn1P12960 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cntn1P12960 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cntn1P12960 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Cntn1P12960 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cntn1P12960 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cntn1P12960 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cntn1P12960 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
Cntn1P12960 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
Cntn1P12960 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cntn1P12960 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cntn1P12960 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms