Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.66■□□□□ 0.26
RaraP11416 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RaraP11416 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RaraP11416 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RaraP11416 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RaraP11416 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RaraP11416 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RaraP11416 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
RaraP11416 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RaraP11416 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RaraP11416 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RaraP11416 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RaraP11416 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
RaraP11416 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.66■□□□□ 0.26
RaraP11416 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.65■□□□□ 0.26
RaraP11416 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RaraP11416 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RaraP11416 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RaraP11416 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.65■□□□□ 0.26
RaraP11416 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RaraP11416 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RaraP11416 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.65■□□□□ 0.26
RaraP11416 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RaraP11416 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RaraP11416 Gm4459-201ENSMUST00000118750 468 ntBASIC16.65■□□□□ 0.26
RaraP11416 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.65■□□□□ 0.26
RaraP11416 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RaraP11416 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RaraP11416 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RaraP11416 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RaraP11416 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
RaraP11416 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RaraP11416 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RaraP11416 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RaraP11416 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RaraP11416 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
RaraP11416 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RaraP11416 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RaraP11416 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.65■□□□□ 0.26
RaraP11416 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
RaraP11416 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
RaraP11416 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RaraP11416 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RaraP11416 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RaraP11416 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RaraP11416 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RaraP11416 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RaraP11416 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RaraP11416 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RaraP11416 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RaraP11416 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RaraP11416 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RaraP11416 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RaraP11416 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RaraP11416 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RaraP11416 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RaraP11416 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RaraP11416 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RaraP11416 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RaraP11416 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RaraP11416 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RaraP11416 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RaraP11416 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RaraP11416 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RaraP11416 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RaraP11416 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RaraP11416 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RaraP11416 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RaraP11416 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.63■□□□□ 0.25
RaraP11416 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.63■□□□□ 0.25
RaraP11416 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RaraP11416 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.63■□□□□ 0.25
RaraP11416 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.63■□□□□ 0.25
RaraP11416 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RaraP11416 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RaraP11416 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RaraP11416 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RaraP11416 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
RaraP11416 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RaraP11416 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RaraP11416 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RaraP11416 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RaraP11416 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RaraP11416 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RaraP11416 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RaraP11416 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
RaraP11416 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RaraP11416 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RaraP11416 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RaraP11416 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RaraP11416 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RaraP11416 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RaraP11416 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RaraP11416 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RaraP11416 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RaraP11416 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.62■□□□□ 0.25
RaraP11416 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RaraP11416 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.62■□□□□ 0.25
RaraP11416 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RaraP11416 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms