Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Smim1P0C8K7 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smim1P0C8K7 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Smim1P0C8K7 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smim1P0C8K7 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smim1P0C8K7 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smim1P0C8K7 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smim1P0C8K7 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC10.61□□□□□ -0.71
Smim1P0C8K7 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smim1P0C8K7 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smim1P0C8K7 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC10.61□□□□□ -0.71
Smim1P0C8K7 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smim1P0C8K7 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smim1P0C8K7 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smim1P0C8K7 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smim1P0C8K7 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC10.61□□□□□ -0.71
Smim1P0C8K7 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smim1P0C8K7 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smim1P0C8K7 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC10.61□□□□□ -0.71
Smim1P0C8K7 Gm12500-202ENSMUST00000186471 2428 ntBASIC10.61□□□□□ -0.71
Smim1P0C8K7 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC10.61□□□□□ -0.71
Smim1P0C8K7 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Smim1P0C8K7 Gm13186-201ENSMUST00000118031 316 ntBASIC10.61□□□□□ -0.71
Smim1P0C8K7 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC10.61□□□□□ -0.71
Smim1P0C8K7 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC10.61□□□□□ -0.71
Smim1P0C8K7 Gm12821-201ENSMUST00000120022 600 ntBASIC10.61□□□□□ -0.71
Smim1P0C8K7 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC10.61□□□□□ -0.71
Smim1P0C8K7 Gm27454-201ENSMUST00000185090 204 ntBASIC10.61□□□□□ -0.71
Smim1P0C8K7 Gm26524-201ENSMUST00000192339 390 ntBASIC10.61□□□□□ -0.71
Smim1P0C8K7 Gm42545-201ENSMUST00000202755 922 ntBASIC10.61□□□□□ -0.71
Smim1P0C8K7 AC120002.2-201ENSMUST00000220205 773 ntBASIC10.61□□□□□ -0.71
Smim1P0C8K7 Il3ra-202ENSMUST00000223589 738 ntBASIC10.61□□□□□ -0.71
Smim1P0C8K7 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Smim1P0C8K7 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smim1P0C8K7 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smim1P0C8K7 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smim1P0C8K7 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Smim1P0C8K7 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC10.61□□□□□ -0.71
Smim1P0C8K7 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Smim1P0C8K7 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smim1P0C8K7 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smim1P0C8K7 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Smim1P0C8K7 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smim1P0C8K7 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Smim1P0C8K7 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Smim1P0C8K7 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smim1P0C8K7 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smim1P0C8K7 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smim1P0C8K7 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Smim1P0C8K7 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Smim1P0C8K7 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smim1P0C8K7 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smim1P0C8K7 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC10.6□□□□□ -0.71
Smim1P0C8K7 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC10.6□□□□□ -0.71
Smim1P0C8K7 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Smim1P0C8K7 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smim1P0C8K7 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smim1P0C8K7 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC10.6□□□□□ -0.71
Smim1P0C8K7 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC10.6□□□□□ -0.71
Smim1P0C8K7 Gm12382-201ENSMUST00000122005 922 ntBASIC10.6□□□□□ -0.71
Smim1P0C8K7 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Smim1P0C8K7 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Smim1P0C8K7 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC10.6□□□□□ -0.71
Smim1P0C8K7 Gm13241-201ENSMUST00000094493 780 ntBASIC10.6□□□□□ -0.71
Smim1P0C8K7 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smim1P0C8K7 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smim1P0C8K7 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smim1P0C8K7 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smim1P0C8K7 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smim1P0C8K7 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC10.6□□□□□ -0.71
Smim1P0C8K7 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC10.6□□□□□ -0.71
Smim1P0C8K7 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smim1P0C8K7 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smim1P0C8K7 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smim1P0C8K7 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Smim1P0C8K7 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smim1P0C8K7 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smim1P0C8K7 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Smim1P0C8K7 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smim1P0C8K7 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smim1P0C8K7 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smim1P0C8K7 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smim1P0C8K7 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Smim1P0C8K7 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smim1P0C8K7 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smim1P0C8K7 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smim1P0C8K7 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Smim1P0C8K7 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smim1P0C8K7 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smim1P0C8K7 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smim1P0C8K7 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smim1P0C8K7 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Smim1P0C8K7 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Smim1P0C8K7 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Smim1P0C8K7 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Smim1P0C8K7 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC10.59□□□□□ -0.71
Smim1P0C8K7 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Smim1P0C8K7 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smim1P0C8K7 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smim1P0C8K7 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms