Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PtcraP0C6B2 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
PtcraP0C6B2 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
PtcraP0C6B2 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
PtcraP0C6B2 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.37□□□□□ -0.27
PtcraP0C6B2 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
PtcraP0C6B2 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PtcraP0C6B2 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
PtcraP0C6B2 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PtcraP0C6B2 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PtcraP0C6B2 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.36□□□□□ -0.27
PtcraP0C6B2 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PtcraP0C6B2 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
PtcraP0C6B2 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.36□□□□□ -0.27
PtcraP0C6B2 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.36□□□□□ -0.27
PtcraP0C6B2 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
PtcraP0C6B2 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
PtcraP0C6B2 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.36□□□□□ -0.27
PtcraP0C6B2 Gm13884-201ENSMUST00000118103 829 ntBASIC13.36□□□□□ -0.27
PtcraP0C6B2 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PtcraP0C6B2 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PtcraP0C6B2 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC13.36□□□□□ -0.27
PtcraP0C6B2 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
PtcraP0C6B2 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC13.36□□□□□ -0.27
PtcraP0C6B2 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PtcraP0C6B2 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.36□□□□□ -0.27
PtcraP0C6B2 Gm6550-201ENSMUST00000187574 993 ntBASIC13.36□□□□□ -0.27
PtcraP0C6B2 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC13.36□□□□□ -0.27
PtcraP0C6B2 AC164629.2-201ENSMUST00000217916 270 ntBASIC13.36□□□□□ -0.27
PtcraP0C6B2 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PtcraP0C6B2 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC13.36□□□□□ -0.27
PtcraP0C6B2 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PtcraP0C6B2 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
PtcraP0C6B2 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
PtcraP0C6B2 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PtcraP0C6B2 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
PtcraP0C6B2 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
PtcraP0C6B2 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.36□□□□□ -0.27
PtcraP0C6B2 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PtcraP0C6B2 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PtcraP0C6B2 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
PtcraP0C6B2 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PtcraP0C6B2 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
PtcraP0C6B2 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
PtcraP0C6B2 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PtcraP0C6B2 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PtcraP0C6B2 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
PtcraP0C6B2 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
PtcraP0C6B2 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
PtcraP0C6B2 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.35□□□□□ -0.27
PtcraP0C6B2 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PtcraP0C6B2 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PtcraP0C6B2 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PtcraP0C6B2 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PtcraP0C6B2 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.35□□□□□ -0.27
PtcraP0C6B2 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC13.35□□□□□ -0.27
PtcraP0C6B2 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
PtcraP0C6B2 AV026068-213ENSMUST00000223675 1171 ntBASIC13.35□□□□□ -0.27
PtcraP0C6B2 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
PtcraP0C6B2 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
PtcraP0C6B2 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
PtcraP0C6B2 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
PtcraP0C6B2 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PtcraP0C6B2 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PtcraP0C6B2 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PtcraP0C6B2 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.35□□□□□ -0.27
PtcraP0C6B2 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PtcraP0C6B2 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PtcraP0C6B2 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.35□□□□□ -0.27
PtcraP0C6B2 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PtcraP0C6B2 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PtcraP0C6B2 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PtcraP0C6B2 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
PtcraP0C6B2 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PtcraP0C6B2 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PtcraP0C6B2 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
PtcraP0C6B2 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
PtcraP0C6B2 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PtcraP0C6B2 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
PtcraP0C6B2 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PtcraP0C6B2 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
PtcraP0C6B2 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.34□□□□□ -0.27
PtcraP0C6B2 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.34□□□□□ -0.27
PtcraP0C6B2 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PtcraP0C6B2 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC13.34□□□□□ -0.27
PtcraP0C6B2 Gm5682-201ENSMUST00000173402 505 ntBASIC13.34□□□□□ -0.27
PtcraP0C6B2 Gm5864-201ENSMUST00000202263 970 ntBASIC13.34□□□□□ -0.27
PtcraP0C6B2 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC13.34□□□□□ -0.27
PtcraP0C6B2 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.34□□□□□ -0.27
PtcraP0C6B2 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PtcraP0C6B2 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PtcraP0C6B2 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.34□□□□□ -0.27
PtcraP0C6B2 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PtcraP0C6B2 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
PtcraP0C6B2 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PtcraP0C6B2 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PtcraP0C6B2 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PtcraP0C6B2 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
PtcraP0C6B2 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PtcraP0C6B2 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms