Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col4a2P08122 Gm14719-201ENSMUST00000121891 340 ntBASIC14.16□□□□□ -0.14
Col4a2P08122 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.16□□□□□ -0.14
Col4a2P08122 Gm16026-204ENSMUST00000162652 683 ntBASIC14.16□□□□□ -0.14
Col4a2P08122 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col4a2P08122 Gm17837-201ENSMUST00000186435 985 ntBASIC14.16□□□□□ -0.14
Col4a2P08122 Gm7730-201ENSMUST00000212486 454 ntBASIC14.16□□□□□ -0.14
Col4a2P08122 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Col4a2P08122 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Col4a2P08122 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Col4a2P08122 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Col4a2P08122 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Col4a2P08122 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col4a2P08122 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col4a2P08122 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Col4a2P08122 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col4a2P08122 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC14.16□□□□□ -0.14
Col4a2P08122 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col4a2P08122 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col4a2P08122 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col4a2P08122 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col4a2P08122 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col4a2P08122 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col4a2P08122 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a2P08122 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a2P08122 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a2P08122 Gm27920-201ENSMUST00000183953 96 ntBASIC14.15□□□□□ -0.14
Col4a2P08122 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a2P08122 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC14.15□□□□□ -0.14
Col4a2P08122 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a2P08122 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a2P08122 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Col4a2P08122 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a2P08122 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a2P08122 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.15□□□□□ -0.14
Col4a2P08122 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a2P08122 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a2P08122 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a2P08122 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a2P08122 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a2P08122 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a2P08122 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a2P08122 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a2P08122 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a2P08122 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a2P08122 Gm11543-201ENSMUST00000120758 370 ntBASIC14.15□□□□□ -0.14
Col4a2P08122 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.15□□□□□ -0.14
Col4a2P08122 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a2P08122 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a2P08122 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a2P08122 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a2P08122 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.15□□□□□ -0.14
Col4a2P08122 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a2P08122 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a2P08122 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Col4a2P08122 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a2P08122 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Col4a2P08122 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.14□□□□□ -0.15
Col4a2P08122 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.14□□□□□ -0.15
Col4a2P08122 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col4a2P08122 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col4a2P08122 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col4a2P08122 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col4a2P08122 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.14□□□□□ -0.15
Col4a2P08122 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col4a2P08122 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col4a2P08122 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.14□□□□□ -0.15
Col4a2P08122 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.14□□□□□ -0.15
Col4a2P08122 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Col4a2P08122 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Col4a2P08122 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.14□□□□□ -0.15
Col4a2P08122 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col4a2P08122 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col4a2P08122 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col4a2P08122 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col4a2P08122 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col4a2P08122 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col4a2P08122 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col4a2P08122 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col4a2P08122 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col4a2P08122 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col4a2P08122 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col4a2P08122 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col4a2P08122 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col4a2P08122 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Col4a2P08122 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col4a2P08122 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Col4a2P08122 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.13□□□□□ -0.15
Col4a2P08122 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Col4a2P08122 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.13□□□□□ -0.15
Col4a2P08122 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col4a2P08122 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col4a2P08122 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col4a2P08122 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col4a2P08122 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col4a2P08122 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col4a2P08122 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col4a2P08122 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col4a2P08122 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col4a2P08122 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms