Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CfdP03953 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
CfdP03953 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CfdP03953 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CfdP03953 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CfdP03953 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.87□□□□□ -0.35
CfdP03953 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CfdP03953 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CfdP03953 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
CfdP03953 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
CfdP03953 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CfdP03953 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CfdP03953 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CfdP03953 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC12.87□□□□□ -0.35
CfdP03953 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
CfdP03953 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.87□□□□□ -0.35
CfdP03953 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC12.87□□□□□ -0.35
CfdP03953 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CfdP03953 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CfdP03953 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC12.87□□□□□ -0.35
CfdP03953 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.87□□□□□ -0.35
CfdP03953 AC122351.1-201ENSMUST00000220467 126 ntBASIC12.87□□□□□ -0.35
CfdP03953 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CfdP03953 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CfdP03953 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CfdP03953 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
CfdP03953 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CfdP03953 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
CfdP03953 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CfdP03953 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CfdP03953 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.87□□□□□ -0.35
CfdP03953 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CfdP03953 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CfdP03953 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CfdP03953 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CfdP03953 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CfdP03953 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CfdP03953 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CfdP03953 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
CfdP03953 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CfdP03953 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CfdP03953 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CfdP03953 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CfdP03953 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CfdP03953 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CfdP03953 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
CfdP03953 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.86□□□□□ -0.35
CfdP03953 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.86□□□□□ -0.35
CfdP03953 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CfdP03953 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CfdP03953 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CfdP03953 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CfdP03953 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CfdP03953 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CfdP03953 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CfdP03953 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CfdP03953 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CfdP03953 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
CfdP03953 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CfdP03953 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC12.86□□□□□ -0.35
CfdP03953 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC12.86□□□□□ -0.35
CfdP03953 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC12.86□□□□□ -0.35
CfdP03953 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
CfdP03953 Mir1668-201ENSMUST00000184114 107 ntBASIC12.86□□□□□ -0.35
CfdP03953 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CfdP03953 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CfdP03953 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CfdP03953 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
CfdP03953 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CfdP03953 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CfdP03953 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CfdP03953 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CfdP03953 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CfdP03953 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CfdP03953 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
CfdP03953 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CfdP03953 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CfdP03953 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.86□□□□□ -0.35
CfdP03953 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CfdP03953 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CfdP03953 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CfdP03953 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CfdP03953 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CfdP03953 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CfdP03953 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.85□□□□□ -0.35
CfdP03953 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CfdP03953 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CfdP03953 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CfdP03953 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CfdP03953 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CfdP03953 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
CfdP03953 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CfdP03953 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CfdP03953 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CfdP03953 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CfdP03953 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.85□□□□□ -0.35
CfdP03953 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
CfdP03953 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CfdP03953 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CfdP03953 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms