Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Hoxa3P02831 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa3P02831 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa3P02831 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa3P02831 AC122901.1-201ENSMUST00000214203 1790 ntBASIC12.92□□□□□ -0.34
Hoxa3P02831 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa3P02831 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.91□□□□□ -0.34
Hoxa3P02831 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa3P02831 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa3P02831 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa3P02831 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa3P02831 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa3P02831 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa3P02831 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa3P02831 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa3P02831 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa3P02831 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.91□□□□□ -0.34
Hoxa3P02831 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa3P02831 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa3P02831 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Hoxa3P02831 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa3P02831 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa3P02831 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.91□□□□□ -0.34
Hoxa3P02831 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Hoxa3P02831 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Hoxa3P02831 Gm14140-201ENSMUST00000119999 995 ntBASIC12.91□□□□□ -0.34
Hoxa3P02831 Gm11594-201ENSMUST00000122313 162 ntBASIC12.91□□□□□ -0.34
Hoxa3P02831 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.91□□□□□ -0.34
Hoxa3P02831 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC12.91□□□□□ -0.34
Hoxa3P02831 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC12.91□□□□□ -0.34
Hoxa3P02831 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC12.91□□□□□ -0.34
Hoxa3P02831 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa3P02831 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa3P02831 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa3P02831 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa3P02831 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Hoxa3P02831 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa3P02831 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa3P02831 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa3P02831 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Hoxa3P02831 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa3P02831 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa3P02831 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa3P02831 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa3P02831 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa3P02831 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa3P02831 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Hoxa3P02831 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa3P02831 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa3P02831 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa3P02831 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa3P02831 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa3P02831 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxa3P02831 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Hoxa3P02831 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxa3P02831 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxa3P02831 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxa3P02831 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
Hoxa3P02831 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxa3P02831 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxa3P02831 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxa3P02831 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxa3P02831 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxa3P02831 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxa3P02831 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxa3P02831 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxa3P02831 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC12.9□□□□□ -0.34
Hoxa3P02831 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxa3P02831 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxa3P02831 Gm5264-201ENSMUST00000190584 848 ntBASIC12.9□□□□□ -0.34
Hoxa3P02831 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC12.9□□□□□ -0.34
Hoxa3P02831 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxa3P02831 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxa3P02831 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxa3P02831 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxa3P02831 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxa3P02831 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC12.9□□□□□ -0.34
Hoxa3P02831 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxa3P02831 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxa3P02831 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Hoxa3P02831 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
Hoxa3P02831 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxa3P02831 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC12.89□□□□□ -0.35
Hoxa3P02831 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxa3P02831 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxa3P02831 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxa3P02831 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxa3P02831 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxa3P02831 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxa3P02831 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Hoxa3P02831 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxa3P02831 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxa3P02831 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxa3P02831 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC12.89□□□□□ -0.35
Hoxa3P02831 Gm2308-201ENSMUST00000166539 1004 ntBASIC12.89□□□□□ -0.35
Hoxa3P02831 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC12.89□□□□□ -0.35
Hoxa3P02831 Gm37935-201ENSMUST00000192012 982 ntBASIC12.89□□□□□ -0.35
Hoxa3P02831 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.89□□□□□ -0.35
Hoxa3P02831 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxa3P02831 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms