Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
TcraP01849 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TcraP01849 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TcraP01849 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TcraP01849 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TcraP01849 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TcraP01849 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TcraP01849 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TcraP01849 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
TcraP01849 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
TcraP01849 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
TcraP01849 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TcraP01849 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC11.26□□□□□ -0.61
TcraP01849 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
TcraP01849 Gm22240-201ENSMUST00000175225 82 ntBASIC11.26□□□□□ -0.61
TcraP01849 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
TcraP01849 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC11.26□□□□□ -0.61
TcraP01849 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC11.26□□□□□ -0.61
TcraP01849 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TcraP01849 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TcraP01849 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC11.26□□□□□ -0.61
TcraP01849 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC11.26□□□□□ -0.61
TcraP01849 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TcraP01849 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
TcraP01849 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TcraP01849 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
TcraP01849 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TcraP01849 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
TcraP01849 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TcraP01849 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
TcraP01849 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
TcraP01849 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
TcraP01849 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
TcraP01849 Gm6190-201ENSMUST00000220683 1374 ntBASIC11.26□□□□□ -0.61
TcraP01849 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TcraP01849 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TcraP01849 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TcraP01849 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
TcraP01849 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TcraP01849 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
TcraP01849 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TcraP01849 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
TcraP01849 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
TcraP01849 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
TcraP01849 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
TcraP01849 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
TcraP01849 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
TcraP01849 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TcraP01849 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
TcraP01849 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
TcraP01849 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
TcraP01849 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
TcraP01849 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
TcraP01849 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
TcraP01849 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
TcraP01849 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
TcraP01849 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
TcraP01849 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TcraP01849 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC11.25□□□□□ -0.61
TcraP01849 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
TcraP01849 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TcraP01849 AC120002.2-201ENSMUST00000220205 773 ntBASIC11.25□□□□□ -0.61
TcraP01849 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC11.25□□□□□ -0.61
TcraP01849 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
TcraP01849 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TcraP01849 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
TcraP01849 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
TcraP01849 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
TcraP01849 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
TcraP01849 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TcraP01849 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TcraP01849 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
TcraP01849 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TcraP01849 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
TcraP01849 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TcraP01849 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
TcraP01849 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TcraP01849 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TcraP01849 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
TcraP01849 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TcraP01849 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TcraP01849 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
TcraP01849 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TcraP01849 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
TcraP01849 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TcraP01849 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TcraP01849 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TcraP01849 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TcraP01849 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
TcraP01849 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TcraP01849 Gm715-201ENSMUST00000117865 831 ntBASIC11.24□□□□□ -0.61
TcraP01849 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC11.24□□□□□ -0.61
TcraP01849 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC11.24□□□□□ -0.61
TcraP01849 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC11.24□□□□□ -0.61
TcraP01849 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC11.24□□□□□ -0.61
TcraP01849 Il3ra-202ENSMUST00000223589 738 ntBASIC11.24□□□□□ -0.61
TcraP01849 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TcraP01849 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TcraP01849 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
TcraP01849 Gm43697-201ENSMUST00000199637 2581 ntBASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms