Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vti1aO89116 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Vti1aO89116 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vti1aO89116 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
Vti1aO89116 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vti1aO89116 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vti1aO89116 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vti1aO89116 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Vti1aO89116 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vti1aO89116 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.57■□□□□ 0.24
Vti1aO89116 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vti1aO89116 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
Vti1aO89116 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vti1aO89116 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Vti1aO89116 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vti1aO89116 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vti1aO89116 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Vti1aO89116 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vti1aO89116 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vti1aO89116 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Vti1aO89116 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Vti1aO89116 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.57■□□□□ 0.24
Vti1aO89116 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vti1aO89116 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Vti1aO89116 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.57■□□□□ 0.24
Vti1aO89116 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC16.57■□□□□ 0.24
Vti1aO89116 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC16.57■□□□□ 0.24
Vti1aO89116 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Vti1aO89116 Gm4899-201ENSMUST00000178708 719 ntBASIC16.57■□□□□ 0.24
Vti1aO89116 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC16.57■□□□□ 0.24
Vti1aO89116 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.57■□□□□ 0.24
Vti1aO89116 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Vti1aO89116 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vti1aO89116 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vti1aO89116 Prob1-201ENSMUST00000097619 3021 ntBASIC16.57■□□□□ 0.24
Vti1aO89116 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vti1aO89116 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.57■□□□□ 0.24
Vti1aO89116 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vti1aO89116 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vti1aO89116 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vti1aO89116 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Vti1aO89116 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vti1aO89116 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vti1aO89116 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vti1aO89116 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vti1aO89116 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.56■□□□□ 0.24
Vti1aO89116 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Vti1aO89116 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Vti1aO89116 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vti1aO89116 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vti1aO89116 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vti1aO89116 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Vti1aO89116 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vti1aO89116 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vti1aO89116 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC16.56■□□□□ 0.24
Vti1aO89116 Gm27300-201ENSMUST00000184085 97 ntBASIC16.56■□□□□ 0.24
Vti1aO89116 Gm27335-201ENSMUST00000184758 97 ntBASIC16.56■□□□□ 0.24
Vti1aO89116 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.56■□□□□ 0.24
Vti1aO89116 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vti1aO89116 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Vti1aO89116 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Vti1aO89116 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vti1aO89116 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vti1aO89116 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Vti1aO89116 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Vti1aO89116 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Vti1aO89116 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.56■□□□□ 0.24
Vti1aO89116 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vti1aO89116 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vti1aO89116 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vti1aO89116 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vti1aO89116 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vti1aO89116 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Vti1aO89116 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Vti1aO89116 Grk6-207ENSMUST00000225925 2769 ntBASIC16.55■□□□□ 0.24
Vti1aO89116 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vti1aO89116 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vti1aO89116 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vti1aO89116 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC16.55■□□□□ 0.24
Vti1aO89116 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vti1aO89116 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vti1aO89116 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Vti1aO89116 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vti1aO89116 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vti1aO89116 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vti1aO89116 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vti1aO89116 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vti1aO89116 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vti1aO89116 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vti1aO89116 Gm15358-201ENSMUST00000119249 520 ntBASIC16.55■□□□□ 0.24
Vti1aO89116 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.55■□□□□ 0.24
Vti1aO89116 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.55■□□□□ 0.24
Vti1aO89116 Gm10576-201ENSMUST00000191927 825 ntBASIC16.55■□□□□ 0.24
Vti1aO89116 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vti1aO89116 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Vti1aO89116 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vti1aO89116 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vti1aO89116 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vti1aO89116 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vti1aO89116 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms