Protein–RNA interactions for Protein: O88879

Apaf1, Apoptotic protease-activating factor 1, mousemouse

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apaf1O88879 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Apaf1O88879 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Apaf1O88879 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Apaf1O88879 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Apaf1O88879 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Apaf1O88879 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Apaf1O88879 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Apaf1O88879 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Apaf1O88879 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Apaf1O88879 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Apaf1O88879 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Apaf1O88879 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Apaf1O88879 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Apaf1O88879 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Apaf1O88879 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Apaf1O88879 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
Apaf1O88879 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Apaf1O88879 AC159295.1-201ENSMUST00000225326 940 ntBASIC19.96■□□□□ 0.79
Apaf1O88879 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Apaf1O88879 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Apaf1O88879 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Apaf1O88879 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Apaf1O88879 Gm10175-201ENSMUST00000086013 645 ntBASIC19.96■□□□□ 0.79
Apaf1O88879 Gm29361-201ENSMUST00000183323 2000 ntBASIC19.96■□□□□ 0.79
Apaf1O88879 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Apaf1O88879 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Apaf1O88879 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Apaf1O88879 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Apaf1O88879 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Apaf1O88879 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Apaf1O88879 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Apaf1O88879 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
Apaf1O88879 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Apaf1O88879 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Apaf1O88879 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC19.95■□□□□ 0.78
Apaf1O88879 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Apaf1O88879 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
Apaf1O88879 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Apaf1O88879 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Apaf1O88879 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Apaf1O88879 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Apaf1O88879 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Apaf1O88879 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC19.95■□□□□ 0.78
Apaf1O88879 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Apaf1O88879 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Apaf1O88879 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC19.95■□□□□ 0.78
Apaf1O88879 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Apaf1O88879 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Apaf1O88879 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Apaf1O88879 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC19.95■□□□□ 0.78
Apaf1O88879 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Apaf1O88879 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Apaf1O88879 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Apaf1O88879 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Apaf1O88879 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Apaf1O88879 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Apaf1O88879 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC19.94■□□□□ 0.78
Apaf1O88879 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Apaf1O88879 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Apaf1O88879 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Apaf1O88879 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Apaf1O88879 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Apaf1O88879 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Apaf1O88879 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Apaf1O88879 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
Apaf1O88879 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC19.94■□□□□ 0.78
Apaf1O88879 Gm25911-201ENSMUST00000157621 56 ntBASIC19.94■□□□□ 0.78
Apaf1O88879 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC19.94■□□□□ 0.78
Apaf1O88879 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Apaf1O88879 AC174742.1-201ENSMUST00000218272 304 ntBASIC19.94■□□□□ 0.78
Apaf1O88879 Bloc1s5-203ENSMUST00000224902 612 ntBASIC19.94■□□□□ 0.78
Apaf1O88879 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Apaf1O88879 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
Apaf1O88879 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC19.94■□□□□ 0.78
Apaf1O88879 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
Apaf1O88879 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Apaf1O88879 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Apaf1O88879 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Apaf1O88879 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Apaf1O88879 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Apaf1O88879 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
Apaf1O88879 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Apaf1O88879 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Apaf1O88879 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Apaf1O88879 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Apaf1O88879 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
Apaf1O88879 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Apaf1O88879 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Apaf1O88879 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC19.93■□□□□ 0.78
Apaf1O88879 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Apaf1O88879 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC19.93■□□□□ 0.78
Apaf1O88879 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Apaf1O88879 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Apaf1O88879 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Apaf1O88879 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Apaf1O88879 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Apaf1O88879 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Apaf1O88879 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Apaf1O88879 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Apaf1O88879 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms