Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.74□□□□□ -0.05
Best1O88870 Gm27494-201ENSMUST00000184735 189 ntBASIC14.74□□□□□ -0.05
Best1O88870 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.74□□□□□ -0.05
Best1O88870 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Best1O88870 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Best1O88870 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Best1O88870 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Best1O88870 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Best1O88870 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Best1O88870 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Best1O88870 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Best1O88870 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Best1O88870 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Best1O88870 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Best1O88870 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Best1O88870 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Best1O88870 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.73□□□□□ -0.05
Best1O88870 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Best1O88870 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Best1O88870 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Best1O88870 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Best1O88870 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Best1O88870 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Best1O88870 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Best1O88870 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Best1O88870 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Best1O88870 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Best1O88870 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Best1O88870 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Best1O88870 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.73□□□□□ -0.05
Best1O88870 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Best1O88870 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.73□□□□□ -0.05
Best1O88870 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.73□□□□□ -0.05
Best1O88870 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Best1O88870 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Best1O88870 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.73□□□□□ -0.05
Best1O88870 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Best1O88870 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Best1O88870 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.73□□□□□ -0.05
Best1O88870 Gm10154-201ENSMUST00000084445 354 ntBASIC14.73□□□□□ -0.05
Best1O88870 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.73□□□□□ -0.05
Best1O88870 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Best1O88870 Dancr-204ENSMUST00000132389 2347 ntBASIC14.73□□□□□ -0.05
Best1O88870 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Best1O88870 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.73□□□□□ -0.05
Best1O88870 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Best1O88870 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.73□□□□□ -0.05
Best1O88870 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Best1O88870 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Best1O88870 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Best1O88870 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Best1O88870 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Best1O88870 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Best1O88870 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Best1O88870 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Best1O88870 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Best1O88870 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Best1O88870 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Best1O88870 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Best1O88870 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Best1O88870 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.72□□□□□ -0.05
Best1O88870 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Best1O88870 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Best1O88870 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Best1O88870 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.72□□□□□ -0.05
Best1O88870 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.72□□□□□ -0.05
Best1O88870 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Best1O88870 Rpph1-201ENSMUST00000175096 319 ntBASIC14.72□□□□□ -0.05
Best1O88870 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.72□□□□□ -0.05
Best1O88870 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.72□□□□□ -0.05
Best1O88870 Chchd1-203ENSMUST00000224633 557 ntBASIC14.72□□□□□ -0.05
Best1O88870 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.72□□□□□ -0.05
Best1O88870 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Best1O88870 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.72□□□□□ -0.05
Best1O88870 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Best1O88870 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Best1O88870 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Best1O88870 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Best1O88870 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Best1O88870 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.72□□□□□ -0.05
Best1O88870 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Best1O88870 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Best1O88870 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Best1O88870 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Best1O88870 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Best1O88870 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Best1O88870 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Best1O88870 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Best1O88870 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Best1O88870 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
Best1O88870 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Best1O88870 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Best1O88870 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.71□□□□□ -0.05
Best1O88870 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Best1O88870 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Best1O88870 Gm11025-201ENSMUST00000140773 466 ntBASIC14.71□□□□□ -0.05
Best1O88870 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Best1O88870 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.71□□□□□ -0.05
Best1O88870 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.71□□□□□ -0.05
Best1O88870 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms