Protein–RNA interactions for Protein: O88627

Slc28a2, Sodium/nucleoside cotransporter 2, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a2O88627 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Slc28a2O88627 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Slc28a2O88627 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Slc28a2O88627 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Slc28a2O88627 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Slc28a2O88627 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Slc28a2O88627 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Slc28a2O88627 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Slc28a2O88627 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Slc28a2O88627 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Slc28a2O88627 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Slc28a2O88627 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Slc28a2O88627 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.71□□□□□ -0.22
Slc28a2O88627 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Slc28a2O88627 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Slc28a2O88627 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Slc28a2O88627 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Slc28a2O88627 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc28a2O88627 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc28a2O88627 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Slc28a2O88627 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc28a2O88627 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Slc28a2O88627 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc28a2O88627 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc28a2O88627 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc28a2O88627 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc28a2O88627 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Slc28a2O88627 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc28a2O88627 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Slc28a2O88627 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Slc28a2O88627 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Slc28a2O88627 Gm15794-201ENSMUST00000120182 631 ntBASIC13.7□□□□□ -0.22
Slc28a2O88627 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.7□□□□□ -0.22
Slc28a2O88627 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Slc28a2O88627 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc28a2O88627 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc28a2O88627 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc28a2O88627 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.7□□□□□ -0.22
Slc28a2O88627 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Slc28a2O88627 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc28a2O88627 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc28a2O88627 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Slc28a2O88627 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Slc28a2O88627 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc28a2O88627 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc28a2O88627 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Slc28a2O88627 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc28a2O88627 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Slc28a2O88627 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Slc28a2O88627 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC13.69□□□□□ -0.22
Slc28a2O88627 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc28a2O88627 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Slc28a2O88627 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc28a2O88627 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Slc28a2O88627 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc28a2O88627 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Slc28a2O88627 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc28a2O88627 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc28a2O88627 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Slc28a2O88627 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.69□□□□□ -0.22
Slc28a2O88627 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.69□□□□□ -0.22
Slc28a2O88627 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc28a2O88627 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc28a2O88627 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc28a2O88627 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC13.69□□□□□ -0.22
Slc28a2O88627 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Slc28a2O88627 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Slc28a2O88627 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Slc28a2O88627 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Slc28a2O88627 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc28a2O88627 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc28a2O88627 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc28a2O88627 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc28a2O88627 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Slc28a2O88627 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Slc28a2O88627 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc28a2O88627 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc28a2O88627 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc28a2O88627 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc28a2O88627 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.69□□□□□ -0.22
Slc28a2O88627 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc28a2O88627 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc28a2O88627 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Slc28a2O88627 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Slc28a2O88627 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc28a2O88627 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc28a2O88627 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Slc28a2O88627 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.68□□□□□ -0.22
Slc28a2O88627 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Slc28a2O88627 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Slc28a2O88627 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc28a2O88627 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Slc28a2O88627 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.68□□□□□ -0.22
Slc28a2O88627 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Slc28a2O88627 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Slc28a2O88627 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC13.68□□□□□ -0.22
Slc28a2O88627 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.68□□□□□ -0.22
Slc28a2O88627 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc28a2O88627 Gm27742-201ENSMUST00000184667 60 ntBASIC13.68□□□□□ -0.22
Slc28a2O88627 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms