Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim1O70400 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim1O70400 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim1O70400 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim1O70400 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.18■□□□□ 0.02
Pdlim1O70400 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim1O70400 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim1O70400 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Pdlim1O70400 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Pdlim1O70400 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim1O70400 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim1O70400 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim1O70400 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim1O70400 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim1O70400 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim1O70400 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Pdlim1O70400 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Pdlim1O70400 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim1O70400 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim1O70400 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim1O70400 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim1O70400 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Pdlim1O70400 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Pdlim1O70400 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim1O70400 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim1O70400 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.17■□□□□ 0.02
Pdlim1O70400 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.17■□□□□ 0.02
Pdlim1O70400 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Pdlim1O70400 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.17■□□□□ 0.02
Pdlim1O70400 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim1O70400 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim1O70400 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim1O70400 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim1O70400 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim1O70400 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Pdlim1O70400 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim1O70400 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Pdlim1O70400 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim1O70400 Asic1-205ENSMUST00000228185 1818 ntBASIC15.17■□□□□ 0.02
Pdlim1O70400 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim1O70400 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim1O70400 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim1O70400 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim1O70400 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim1O70400 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim1O70400 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
Pdlim1O70400 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.16■□□□□ 0.02
Pdlim1O70400 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim1O70400 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim1O70400 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.16■□□□□ 0.02
Pdlim1O70400 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.16■□□□□ 0.02
Pdlim1O70400 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC15.16■□□□□ 0.02
Pdlim1O70400 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.16■□□□□ 0.02
Pdlim1O70400 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim1O70400 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim1O70400 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pdlim1O70400 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim1O70400 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim1O70400 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim1O70400 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim1O70400 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.16■□□□□ 0.02
Pdlim1O70400 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim1O70400 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Pdlim1O70400 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Pdlim1O70400 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim1O70400 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim1O70400 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim1O70400 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim1O70400 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim1O70400 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim1O70400 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim1O70400 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim1O70400 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim1O70400 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.15■□□□□ 0.02
Pdlim1O70400 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.15■□□□□ 0.02
Pdlim1O70400 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.15■□□□□ 0.02
Pdlim1O70400 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim1O70400 Gm4899-201ENSMUST00000178708 719 ntBASIC15.15■□□□□ 0.02
Pdlim1O70400 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.15■□□□□ 0.02
Pdlim1O70400 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.15■□□□□ 0.02
Pdlim1O70400 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.15■□□□□ 0.02
Pdlim1O70400 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim1O70400 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim1O70400 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.15■□□□□ 0.02
Pdlim1O70400 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim1O70400 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim1O70400 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim1O70400 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.15■□□□□ 0.02
Pdlim1O70400 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.15■□□□□ 0.02
Pdlim1O70400 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim1O70400 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.15■□□□□ 0.02
Pdlim1O70400 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.15■□□□□ 0.02
Pdlim1O70400 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim1O70400 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim1O70400 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim1O70400 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim1O70400 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim1O70400 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Pdlim1O70400 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
Pdlim1O70400 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms