Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Gm8655-201ENSMUST00000221159 852 ntBASIC14.28□□□□□ -0.12
BckdkO55028 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
BckdkO55028 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.28□□□□□ -0.12
BckdkO55028 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
BckdkO55028 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BckdkO55028 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BckdkO55028 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
BckdkO55028 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
BckdkO55028 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BckdkO55028 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.28□□□□□ -0.12
BckdkO55028 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BckdkO55028 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
BckdkO55028 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
BckdkO55028 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
BckdkO55028 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.27□□□□□ -0.12
BckdkO55028 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
BckdkO55028 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
BckdkO55028 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
BckdkO55028 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
BckdkO55028 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
BckdkO55028 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
BckdkO55028 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
BckdkO55028 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
BckdkO55028 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
BckdkO55028 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.27□□□□□ -0.12
BckdkO55028 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
BckdkO55028 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
BckdkO55028 Gm4459-201ENSMUST00000118750 468 ntBASIC14.27□□□□□ -0.13
BckdkO55028 Gm25406-201ENSMUST00000157599 105 ntBASIC14.27□□□□□ -0.13
BckdkO55028 Gm7230-201ENSMUST00000173026 815 ntBASIC14.27□□□□□ -0.13
BckdkO55028 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
BckdkO55028 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.27□□□□□ -0.13
BckdkO55028 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.27□□□□□ -0.13
BckdkO55028 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
BckdkO55028 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
BckdkO55028 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
BckdkO55028 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
BckdkO55028 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
BckdkO55028 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
BckdkO55028 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
BckdkO55028 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
BckdkO55028 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.27□□□□□ -0.13
BckdkO55028 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
BckdkO55028 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BckdkO55028 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
BckdkO55028 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BckdkO55028 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
BckdkO55028 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BckdkO55028 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
BckdkO55028 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
BckdkO55028 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BckdkO55028 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BckdkO55028 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
BckdkO55028 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
BckdkO55028 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BckdkO55028 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
BckdkO55028 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
BckdkO55028 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.26□□□□□ -0.13
BckdkO55028 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
BckdkO55028 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
BckdkO55028 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BckdkO55028 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.26□□□□□ -0.13
BckdkO55028 Gm13418-201ENSMUST00000119097 944 ntBASIC14.26□□□□□ -0.13
BckdkO55028 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.26□□□□□ -0.13
BckdkO55028 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.26□□□□□ -0.13
BckdkO55028 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.26□□□□□ -0.13
BckdkO55028 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.26□□□□□ -0.13
BckdkO55028 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.26□□□□□ -0.13
BckdkO55028 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BckdkO55028 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
BckdkO55028 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BckdkO55028 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
BckdkO55028 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BckdkO55028 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
BckdkO55028 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.26□□□□□ -0.13
BckdkO55028 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
BckdkO55028 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
BckdkO55028 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BckdkO55028 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BckdkO55028 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
BckdkO55028 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BckdkO55028 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
BckdkO55028 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.25□□□□□ -0.13
BckdkO55028 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
BckdkO55028 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BckdkO55028 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BckdkO55028 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
BckdkO55028 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BckdkO55028 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BckdkO55028 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
BckdkO55028 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BckdkO55028 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
BckdkO55028 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BckdkO55028 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BckdkO55028 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
BckdkO55028 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
BckdkO55028 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BckdkO55028 Gm8097-201ENSMUST00000117903 829 ntBASIC14.25□□□□□ -0.13
BckdkO55028 Gm1401-201ENSMUST00000122048 772 ntBASIC14.25□□□□□ -0.13
BckdkO55028 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms