Protein–RNA interactions for Protein: O35943

Fxn, Frataxin, mitochondrial, mousemouse

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FxnO35943 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
FxnO35943 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FxnO35943 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FxnO35943 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FxnO35943 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
FxnO35943 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
FxnO35943 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
FxnO35943 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
FxnO35943 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FxnO35943 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
FxnO35943 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.37□□□□□ -0.11
FxnO35943 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FxnO35943 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FxnO35943 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FxnO35943 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FxnO35943 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.37□□□□□ -0.11
FxnO35943 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.37□□□□□ -0.11
FxnO35943 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FxnO35943 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
FxnO35943 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FxnO35943 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
FxnO35943 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FxnO35943 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FxnO35943 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
FxnO35943 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FxnO35943 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FxnO35943 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
FxnO35943 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FxnO35943 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FxnO35943 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FxnO35943 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.37□□□□□ -0.11
FxnO35943 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
FxnO35943 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
FxnO35943 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
FxnO35943 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.36□□□□□ -0.11
FxnO35943 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
FxnO35943 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
FxnO35943 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FxnO35943 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
FxnO35943 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FxnO35943 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FxnO35943 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
FxnO35943 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.36□□□□□ -0.11
FxnO35943 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
FxnO35943 Gm7284-201ENSMUST00000131667 944 ntBASIC14.36□□□□□ -0.11
FxnO35943 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FxnO35943 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FxnO35943 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
FxnO35943 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.36□□□□□ -0.11
FxnO35943 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FxnO35943 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
FxnO35943 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.36□□□□□ -0.11
FxnO35943 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
FxnO35943 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FxnO35943 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
FxnO35943 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.36□□□□□ -0.11
FxnO35943 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FxnO35943 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FxnO35943 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
FxnO35943 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
FxnO35943 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
FxnO35943 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FxnO35943 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
FxnO35943 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
FxnO35943 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FxnO35943 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
FxnO35943 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FxnO35943 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FxnO35943 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
FxnO35943 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FxnO35943 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.35□□□□□ -0.11
FxnO35943 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
FxnO35943 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FxnO35943 Gm12497-201ENSMUST00000138778 237 ntBASIC14.35□□□□□ -0.11
FxnO35943 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
FxnO35943 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.35□□□□□ -0.11
FxnO35943 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.35□□□□□ -0.11
FxnO35943 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.35□□□□□ -0.11
FxnO35943 AC153937.1-201ENSMUST00000218734 412 ntBASIC14.35□□□□□ -0.11
FxnO35943 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FxnO35943 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FxnO35943 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FxnO35943 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
FxnO35943 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.35□□□□□ -0.11
FxnO35943 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FxnO35943 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
FxnO35943 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FxnO35943 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
FxnO35943 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FxnO35943 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.34□□□□□ -0.11
FxnO35943 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FxnO35943 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FxnO35943 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
FxnO35943 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
FxnO35943 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
FxnO35943 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FxnO35943 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
FxnO35943 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
FxnO35943 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.34□□□□□ -0.11
FxnO35943 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms