Protein–RNA interactions for Protein: O35638

Stag2, Cohesin subunit SA-2, mousemouse

Predictions only

Length 1,231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag2O35638 Gm45293-201ENSMUST00000209754 1812 ntBASIC17.58■□□□□ 0.41
Stag2O35638 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Stag2O35638 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Stag2O35638 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Stag2O35638 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Stag2O35638 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Stag2O35638 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
Stag2O35638 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Stag2O35638 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.58■□□□□ 0.4
Stag2O35638 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Stag2O35638 Gm10175-201ENSMUST00000086013 645 ntBASIC17.58■□□□□ 0.4
Stag2O35638 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Stag2O35638 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Stag2O35638 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Stag2O35638 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Stag2O35638 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
Stag2O35638 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Stag2O35638 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Stag2O35638 AC130669.1-201ENSMUST00000228537 1672 ntBASIC17.58■□□□□ 0.4
Stag2O35638 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Stag2O35638 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Stag2O35638 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.57■□□□□ 0.4
Stag2O35638 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Stag2O35638 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Stag2O35638 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Stag2O35638 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Stag2O35638 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Stag2O35638 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Stag2O35638 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Stag2O35638 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC17.57■□□□□ 0.4
Stag2O35638 AC174742.1-201ENSMUST00000218272 304 ntBASIC17.57■□□□□ 0.4
Stag2O35638 AC159295.1-201ENSMUST00000225326 940 ntBASIC17.57■□□□□ 0.4
Stag2O35638 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Stag2O35638 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Stag2O35638 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Stag2O35638 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.57■□□□□ 0.4
Stag2O35638 Gm29361-201ENSMUST00000183323 2000 ntBASIC17.57■□□□□ 0.4
Stag2O35638 Gm27528-202ENSMUST00000222916 2012 ntBASIC17.57■□□□□ 0.4
Stag2O35638 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.57■□□□□ 0.4
Stag2O35638 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Stag2O35638 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Stag2O35638 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Stag2O35638 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.56■□□□□ 0.4
Stag2O35638 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Stag2O35638 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Stag2O35638 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Stag2O35638 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Stag2O35638 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.56■□□□□ 0.4
Stag2O35638 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC17.56■□□□□ 0.4
Stag2O35638 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Stag2O35638 Gm25911-201ENSMUST00000157621 56 ntBASIC17.56■□□□□ 0.4
Stag2O35638 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC17.56■□□□□ 0.4
Stag2O35638 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.56■□□□□ 0.4
Stag2O35638 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.56■□□□□ 0.4
Stag2O35638 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Stag2O35638 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Stag2O35638 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Stag2O35638 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Stag2O35638 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Stag2O35638 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Stag2O35638 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Stag2O35638 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Stag2O35638 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stag2O35638 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stag2O35638 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stag2O35638 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Stag2O35638 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stag2O35638 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.55■□□□□ 0.4
Stag2O35638 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC17.55■□□□□ 0.4
Stag2O35638 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stag2O35638 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC17.55■□□□□ 0.4
Stag2O35638 Mir3113-201ENSMUST00000175478 76 ntBASIC17.55■□□□□ 0.4
Stag2O35638 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Stag2O35638 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Stag2O35638 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stag2O35638 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stag2O35638 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Stag2O35638 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stag2O35638 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Stag2O35638 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stag2O35638 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stag2O35638 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Stag2O35638 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stag2O35638 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Stag2O35638 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stag2O35638 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stag2O35638 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stag2O35638 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stag2O35638 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Stag2O35638 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC17.54■□□□□ 0.4
Stag2O35638 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stag2O35638 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stag2O35638 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stag2O35638 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stag2O35638 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stag2O35638 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Stag2O35638 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC17.54■□□□□ 0.4
Stag2O35638 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC17.54■□□□□ 0.4
Stag2O35638 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.54■□□□□ 0.4
Stag2O35638 Gm7556-201ENSMUST00000201178 1084 ntBASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms