Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ebf3O08791 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ebf3O08791 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ebf3O08791 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.97■□□□□ 0.15
Ebf3O08791 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.97■□□□□ 0.15
Ebf3O08791 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15.97■□□□□ 0.15
Ebf3O08791 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.97■□□□□ 0.15
Ebf3O08791 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ebf3O08791 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ebf3O08791 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15.97■□□□□ 0.15
Ebf3O08791 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ebf3O08791 Gm10576-201ENSMUST00000191927 825 ntBASIC15.97■□□□□ 0.15
Ebf3O08791 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
Ebf3O08791 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ebf3O08791 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Ebf3O08791 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ebf3O08791 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ebf3O08791 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.97■□□□□ 0.15
Ebf3O08791 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ebf3O08791 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ebf3O08791 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Ebf3O08791 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ebf3O08791 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ebf3O08791 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ebf3O08791 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Ebf3O08791 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Ebf3O08791 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ebf3O08791 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.97■□□□□ 0.15
Ebf3O08791 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ebf3O08791 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Ebf3O08791 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ebf3O08791 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ebf3O08791 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.96■□□□□ 0.15
Ebf3O08791 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ebf3O08791 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ebf3O08791 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ebf3O08791 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ebf3O08791 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ebf3O08791 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ebf3O08791 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.96■□□□□ 0.15
Ebf3O08791 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.96■□□□□ 0.15
Ebf3O08791 Gm9682-201ENSMUST00000197505 556 ntBASIC15.96■□□□□ 0.15
Ebf3O08791 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC15.96■□□□□ 0.15
Ebf3O08791 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.96■□□□□ 0.15
Ebf3O08791 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ebf3O08791 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ebf3O08791 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Ebf3O08791 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ebf3O08791 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Ebf3O08791 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ebf3O08791 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ebf3O08791 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ebf3O08791 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ebf3O08791 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ebf3O08791 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ebf3O08791 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ebf3O08791 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.96■□□□□ 0.15
Ebf3O08791 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ebf3O08791 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.96■□□□□ 0.15
Ebf3O08791 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ebf3O08791 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ebf3O08791 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.96■□□□□ 0.15
Ebf3O08791 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.14
Ebf3O08791 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Ebf3O08791 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Ebf3O08791 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
Ebf3O08791 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Ebf3O08791 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ebf3O08791 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Ebf3O08791 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ebf3O08791 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ebf3O08791 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ebf3O08791 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.95■□□□□ 0.14
Ebf3O08791 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ebf3O08791 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ebf3O08791 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ebf3O08791 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Ebf3O08791 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ebf3O08791 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Ebf3O08791 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Ebf3O08791 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
Ebf3O08791 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ebf3O08791 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Ebf3O08791 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ebf3O08791 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.95■□□□□ 0.14
Ebf3O08791 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ebf3O08791 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Ebf3O08791 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.95■□□□□ 0.14
Ebf3O08791 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ebf3O08791 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ebf3O08791 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ebf3O08791 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Ebf3O08791 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Ebf3O08791 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ebf3O08791 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ebf3O08791 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ebf3O08791 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.94■□□□□ 0.14
Ebf3O08791 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ebf3O08791 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ebf3O08791 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms