Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Polr2jO08740 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Polr2jO08740 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Polr2jO08740 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.77□□□□□ -0.04
Polr2jO08740 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Polr2jO08740 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Polr2jO08740 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.77□□□□□ -0.04
Polr2jO08740 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Polr2jO08740 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Polr2jO08740 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Polr2jO08740 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Polr2jO08740 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Polr2jO08740 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Polr2jO08740 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Polr2jO08740 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Polr2jO08740 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Polr2jO08740 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Polr2jO08740 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.77□□□□□ -0.05
Polr2jO08740 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Polr2jO08740 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Polr2jO08740 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Polr2jO08740 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Polr2jO08740 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
Polr2jO08740 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Polr2jO08740 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Polr2jO08740 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.76□□□□□ -0.05
Polr2jO08740 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Polr2jO08740 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Polr2jO08740 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Polr2jO08740 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Polr2jO08740 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Polr2jO08740 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Polr2jO08740 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Polr2jO08740 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Polr2jO08740 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Polr2jO08740 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Polr2jO08740 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Polr2jO08740 Efs-202ENSMUST00000227037 2540 ntBASIC14.76□□□□□ -0.05
Polr2jO08740 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Polr2jO08740 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Polr2jO08740 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Polr2jO08740 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Polr2jO08740 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Polr2jO08740 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Polr2jO08740 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Polr2jO08740 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Polr2jO08740 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Polr2jO08740 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Polr2jO08740 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Polr2jO08740 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.76□□□□□ -0.05
Polr2jO08740 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.75□□□□□ -0.05
Polr2jO08740 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Polr2jO08740 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.75□□□□□ -0.05
Polr2jO08740 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Polr2jO08740 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Polr2jO08740 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Polr2jO08740 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Polr2jO08740 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.75□□□□□ -0.05
Polr2jO08740 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Polr2jO08740 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Polr2jO08740 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Polr2jO08740 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Polr2jO08740 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Polr2jO08740 Gm15794-201ENSMUST00000120182 631 ntBASIC14.75□□□□□ -0.05
Polr2jO08740 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.75□□□□□ -0.05
Polr2jO08740 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.75□□□□□ -0.05
Polr2jO08740 Gm10252-201ENSMUST00000209541 832 ntBASIC14.75□□□□□ -0.05
Polr2jO08740 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Polr2jO08740 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Polr2jO08740 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Polr2jO08740 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Polr2jO08740 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Polr2jO08740 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Polr2jO08740 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Polr2jO08740 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Polr2jO08740 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Polr2jO08740 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Polr2jO08740 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Polr2jO08740 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Polr2jO08740 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.75□□□□□ -0.05
Polr2jO08740 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Polr2jO08740 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Polr2jO08740 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.74□□□□□ -0.05
Polr2jO08740 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Polr2jO08740 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Polr2jO08740 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Polr2jO08740 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Polr2jO08740 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Polr2jO08740 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Polr2jO08740 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Polr2jO08740 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Polr2jO08740 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Polr2jO08740 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
Polr2jO08740 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Polr2jO08740 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Polr2jO08740 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Polr2jO08740 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.74□□□□□ -0.05
Polr2jO08740 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Polr2jO08740 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
Polr2jO08740 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms