Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Colca2F8VPY8 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Colca2F8VPY8 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Colca2F8VPY8 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Colca2F8VPY8 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Colca2F8VPY8 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Colca2F8VPY8 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.48□□□□□ -0.09
Colca2F8VPY8 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.48□□□□□ -0.09
Colca2F8VPY8 Asic1-205ENSMUST00000228185 1818 ntBASIC14.48□□□□□ -0.09
Colca2F8VPY8 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Colca2F8VPY8 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.48□□□□□ -0.09
Colca2F8VPY8 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Colca2F8VPY8 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Colca2F8VPY8 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.48□□□□□ -0.09
Colca2F8VPY8 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Colca2F8VPY8 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.48□□□□□ -0.09
Colca2F8VPY8 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Colca2F8VPY8 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Colca2F8VPY8 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.48□□□□□ -0.09
Colca2F8VPY8 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Colca2F8VPY8 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Colca2F8VPY8 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.48□□□□□ -0.09
Colca2F8VPY8 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Colca2F8VPY8 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Colca2F8VPY8 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Colca2F8VPY8 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Colca2F8VPY8 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Colca2F8VPY8 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.48□□□□□ -0.09
Colca2F8VPY8 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Colca2F8VPY8 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Colca2F8VPY8 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Colca2F8VPY8 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
Colca2F8VPY8 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Colca2F8VPY8 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Colca2F8VPY8 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Colca2F8VPY8 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Colca2F8VPY8 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.47□□□□□ -0.09
Colca2F8VPY8 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Colca2F8VPY8 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.47□□□□□ -0.09
Colca2F8VPY8 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.47□□□□□ -0.09
Colca2F8VPY8 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.47□□□□□ -0.09
Colca2F8VPY8 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.47□□□□□ -0.09
Colca2F8VPY8 Gm8515-201ENSMUST00000194852 576 ntBASIC14.47□□□□□ -0.09
Colca2F8VPY8 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.47□□□□□ -0.09
Colca2F8VPY8 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Colca2F8VPY8 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.47□□□□□ -0.09
Colca2F8VPY8 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Colca2F8VPY8 Gm25857-201ENSMUST00000082788 129 ntBASIC14.47□□□□□ -0.09
Colca2F8VPY8 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Colca2F8VPY8 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Colca2F8VPY8 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Colca2F8VPY8 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Colca2F8VPY8 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Colca2F8VPY8 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Colca2F8VPY8 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Colca2F8VPY8 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Colca2F8VPY8 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Colca2F8VPY8 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Colca2F8VPY8 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.46□□□□□ -0.09
Colca2F8VPY8 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Colca2F8VPY8 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
Colca2F8VPY8 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Colca2F8VPY8 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Colca2F8VPY8 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Colca2F8VPY8 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Colca2F8VPY8 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Colca2F8VPY8 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Colca2F8VPY8 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.46□□□□□ -0.09
Colca2F8VPY8 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Colca2F8VPY8 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.46□□□□□ -0.09
Colca2F8VPY8 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.46□□□□□ -0.09
Colca2F8VPY8 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Colca2F8VPY8 Gm6745-201ENSMUST00000199216 526 ntBASIC14.46□□□□□ -0.09
Colca2F8VPY8 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.46□□□□□ -0.09
Colca2F8VPY8 Gm6180-201ENSMUST00000065243 498 ntBASIC14.46□□□□□ -0.09
Colca2F8VPY8 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Colca2F8VPY8 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Colca2F8VPY8 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Colca2F8VPY8 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Colca2F8VPY8 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Colca2F8VPY8 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Colca2F8VPY8 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Colca2F8VPY8 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Colca2F8VPY8 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Colca2F8VPY8 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Colca2F8VPY8 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Colca2F8VPY8 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Colca2F8VPY8 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Colca2F8VPY8 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Colca2F8VPY8 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.45□□□□□ -0.1
Colca2F8VPY8 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.45□□□□□ -0.1
Colca2F8VPY8 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Colca2F8VPY8 Gm6912-201ENSMUST00000117218 544 ntBASIC14.45□□□□□ -0.1
Colca2F8VPY8 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Colca2F8VPY8 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.45□□□□□ -0.1
Colca2F8VPY8 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Colca2F8VPY8 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Colca2F8VPY8 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.45□□□□□ -0.1
Colca2F8VPY8 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Colca2F8VPY8 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms