Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb9E9Q5G2 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb9E9Q5G2 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb9E9Q5G2 Gm11594-201ENSMUST00000122313 162 ntBASIC18.06■□□□□ 0.48
Pcdhb9E9Q5G2 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC18.06■□□□□ 0.48
Pcdhb9E9Q5G2 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb9E9Q5G2 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC18.06■□□□□ 0.48
Pcdhb9E9Q5G2 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC18.06■□□□□ 0.48
Pcdhb9E9Q5G2 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb9E9Q5G2 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb9E9Q5G2 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb9E9Q5G2 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb9E9Q5G2 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb9E9Q5G2 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb9E9Q5G2 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb9E9Q5G2 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb9E9Q5G2 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb9E9Q5G2 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Pcdhb9E9Q5G2 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Pcdhb9E9Q5G2 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb9E9Q5G2 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb9E9Q5G2 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb9E9Q5G2 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC18.05■□□□□ 0.48
Pcdhb9E9Q5G2 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb9E9Q5G2 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb9E9Q5G2 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb9E9Q5G2 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb9E9Q5G2 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb9E9Q5G2 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb9E9Q5G2 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb9E9Q5G2 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Pcdhb9E9Q5G2 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC18.05■□□□□ 0.48
Pcdhb9E9Q5G2 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb9E9Q5G2 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb9E9Q5G2 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC18.05■□□□□ 0.48
Pcdhb9E9Q5G2 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Pcdhb9E9Q5G2 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb9E9Q5G2 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb9E9Q5G2 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb9E9Q5G2 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb9E9Q5G2 AC025913.2-201ENSMUST00000220136 1766 ntBASIC18.04■□□□□ 0.48
Pcdhb9E9Q5G2 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb9E9Q5G2 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb9E9Q5G2 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb9E9Q5G2 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb9E9Q5G2 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb9E9Q5G2 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb9E9Q5G2 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC18.04■□□□□ 0.48
Pcdhb9E9Q5G2 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC18.04■□□□□ 0.48
Pcdhb9E9Q5G2 Gm5177-201ENSMUST00000183092 997 ntBASIC18.04■□□□□ 0.48
Pcdhb9E9Q5G2 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb9E9Q5G2 Bloc1s5-203ENSMUST00000224902 612 ntBASIC18.04■□□□□ 0.48
Pcdhb9E9Q5G2 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb9E9Q5G2 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb9E9Q5G2 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb9E9Q5G2 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Pcdhb9E9Q5G2 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb9E9Q5G2 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb9E9Q5G2 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb9E9Q5G2 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb9E9Q5G2 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb9E9Q5G2 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb9E9Q5G2 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Pcdhb9E9Q5G2 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
Pcdhb9E9Q5G2 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb9E9Q5G2 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Pcdhb9E9Q5G2 AC154572.2-201ENSMUST00000225105 997 ntBASIC18.03■□□□□ 0.48
Pcdhb9E9Q5G2 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb9E9Q5G2 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb9E9Q5G2 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb9E9Q5G2 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb9E9Q5G2 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Pcdhb9E9Q5G2 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb9E9Q5G2 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb9E9Q5G2 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb9E9Q5G2 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
Pcdhb9E9Q5G2 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb9E9Q5G2 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb9E9Q5G2 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC18.02■□□□□ 0.48
Pcdhb9E9Q5G2 Gm12008-201ENSMUST00000117791 755 ntBASIC18.02■□□□□ 0.48
Pcdhb9E9Q5G2 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb9E9Q5G2 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb9E9Q5G2 Gm25911-201ENSMUST00000157621 56 ntBASIC18.02■□□□□ 0.48
Pcdhb9E9Q5G2 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb9E9Q5G2 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb9E9Q5G2 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC18.02■□□□□ 0.48
Pcdhb9E9Q5G2 Gm45747-201ENSMUST00000212203 999 ntBASIC18.02■□□□□ 0.48
Pcdhb9E9Q5G2 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb9E9Q5G2 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb9E9Q5G2 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb9E9Q5G2 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb9E9Q5G2 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb9E9Q5G2 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb9E9Q5G2 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb9E9Q5G2 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb9E9Q5G2 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb9E9Q5G2 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Pcdhb9E9Q5G2 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhb9E9Q5G2 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhb9E9Q5G2 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms