Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC8.48□□□□□ -1.05
Herc1E9PZP8 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Herc1E9PZP8 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC8.48□□□□□ -1.05
Herc1E9PZP8 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Herc1E9PZP8 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Herc1E9PZP8 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Herc1E9PZP8 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Herc1E9PZP8 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC8.48□□□□□ -1.05
Herc1E9PZP8 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Herc1E9PZP8 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Herc1E9PZP8 Gm44126-201ENSMUST00000204831 514 ntBASIC8.48□□□□□ -1.05
Herc1E9PZP8 Gm10752-201ENSMUST00000218348 729 ntBASIC8.48□□□□□ -1.05
Herc1E9PZP8 Gm8227-201ENSMUST00000223306 571 ntBASIC8.48□□□□□ -1.05
Herc1E9PZP8 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Herc1E9PZP8 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Herc1E9PZP8 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Herc1E9PZP8 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Herc1E9PZP8 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Herc1E9PZP8 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Herc1E9PZP8 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Herc1E9PZP8 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC8.48□□□□□ -1.05
Herc1E9PZP8 Gm37835-201ENSMUST00000193305 361 ntBASIC8.48□□□□□ -1.05
Herc1E9PZP8 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC8.48□□□□□ -1.05
Herc1E9PZP8 Gm6334-201ENSMUST00000207083 228 ntBASIC8.48□□□□□ -1.05
Herc1E9PZP8 AC153974.2-201ENSMUST00000218577 1025 ntBASIC8.48□□□□□ -1.05
Herc1E9PZP8 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Herc1E9PZP8 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Herc1E9PZP8 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Herc1E9PZP8 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Herc1E9PZP8 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Herc1E9PZP8 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Herc1E9PZP8 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Herc1E9PZP8 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Herc1E9PZP8 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC8.48□□□□□ -1.05
Herc1E9PZP8 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Herc1E9PZP8 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Herc1E9PZP8 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Herc1E9PZP8 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Herc1E9PZP8 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Herc1E9PZP8 Gm42442-201ENSMUST00000197951 1133 ntBASIC8.48□□□□□ -1.05
Herc1E9PZP8 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC8.48□□□□□ -1.05
Herc1E9PZP8 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC8.48□□□□□ -1.05
Herc1E9PZP8 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Herc1E9PZP8 Gm24255-201ENSMUST00000104481 128 ntBASIC8.47□□□□□ -1.05
Herc1E9PZP8 Gm10156-201ENSMUST00000122364 462 ntBASIC8.47□□□□□ -1.05
Herc1E9PZP8 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC8.47□□□□□ -1.05
Herc1E9PZP8 Gm20426-201ENSMUST00000173657 440 ntBASIC8.47□□□□□ -1.05
Herc1E9PZP8 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Herc1E9PZP8 AC154846.1-201ENSMUST00000226278 862 ntBASIC8.47□□□□□ -1.05
Herc1E9PZP8 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC8.47□□□□□ -1.05
Herc1E9PZP8 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Herc1E9PZP8 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
Herc1E9PZP8 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Herc1E9PZP8 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Herc1E9PZP8 Dmtn-210ENSMUST00000228824 2377 ntBASIC8.47□□□□□ -1.05
Herc1E9PZP8 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Herc1E9PZP8 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC8.47□□□□□ -1.05
Herc1E9PZP8 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC8.47□□□□□ -1.05
Herc1E9PZP8 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC8.47□□□□□ -1.05
Herc1E9PZP8 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC8.47□□□□□ -1.05
Herc1E9PZP8 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC8.47□□□□□ -1.05
Herc1E9PZP8 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC8.47□□□□□ -1.05
Herc1E9PZP8 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Herc1E9PZP8 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Herc1E9PZP8 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Herc1E9PZP8 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC8.47□□□□□ -1.05
Herc1E9PZP8 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Herc1E9PZP8 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Herc1E9PZP8 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Herc1E9PZP8 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Herc1E9PZP8 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
Herc1E9PZP8 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Herc1E9PZP8 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Herc1E9PZP8 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Herc1E9PZP8 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC8.47□□□□□ -1.05
Herc1E9PZP8 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Herc1E9PZP8 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Herc1E9PZP8 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Herc1E9PZP8 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Herc1E9PZP8 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Herc1E9PZP8 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Herc1E9PZP8 Gm2383-201ENSMUST00000181461 807 ntBASIC8.47□□□□□ -1.05
Herc1E9PZP8 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Herc1E9PZP8 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Herc1E9PZP8 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Herc1E9PZP8 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Herc1E9PZP8 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Herc1E9PZP8 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Herc1E9PZP8 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.05
Herc1E9PZP8 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
Herc1E9PZP8 Gm6015-201ENSMUST00000217493 1586 ntBASIC8.46□□□□□ -1.05
Herc1E9PZP8 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC8.46□□□□□ -1.05
Herc1E9PZP8 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC8.46□□□□□ -1.05
Herc1E9PZP8 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Herc1E9PZP8 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC8.46□□□□□ -1.05
Herc1E9PZP8 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC8.46□□□□□ -1.05
Herc1E9PZP8 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC8.46□□□□□ -1.05
Herc1E9PZP8 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC8.46□□□□□ -1.05
Herc1E9PZP8 Gm27486-201ENSMUST00000184923 80 ntBASIC8.46□□□□□ -1.05
Herc1E9PZP8 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC8.46□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms