Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Gm28043E0CXC2 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Gm28043E0CXC2 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Gm28043E0CXC2 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Gm28043E0CXC2 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Gm28043E0CXC2 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Gm28043E0CXC2 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Gm28043E0CXC2 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Gm28043E0CXC2 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Gm28043E0CXC2 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC15.48■□□□□ 0.07
Gm28043E0CXC2 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Gm28043E0CXC2 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gm28043E0CXC2 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gm28043E0CXC2 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Gm28043E0CXC2 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Gm28043E0CXC2 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gm28043E0CXC2 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.47■□□□□ 0.07
Gm28043E0CXC2 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gm28043E0CXC2 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gm28043E0CXC2 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gm28043E0CXC2 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gm28043E0CXC2 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gm28043E0CXC2 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gm28043E0CXC2 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.47■□□□□ 0.07
Gm28043E0CXC2 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gm28043E0CXC2 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Gm28043E0CXC2 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gm28043E0CXC2 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Gm28043E0CXC2 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.47■□□□□ 0.07
Gm28043E0CXC2 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Gm28043E0CXC2 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.47■□□□□ 0.07
Gm28043E0CXC2 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gm28043E0CXC2 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gm28043E0CXC2 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
Gm28043E0CXC2 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gm28043E0CXC2 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Gm28043E0CXC2 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Gm28043E0CXC2 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gm28043E0CXC2 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gm28043E0CXC2 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gm28043E0CXC2 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gm28043E0CXC2 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gm28043E0CXC2 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Gm28043E0CXC2 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.46■□□□□ 0.07
Gm28043E0CXC2 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Gm28043E0CXC2 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
Gm28043E0CXC2 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Gm28043E0CXC2 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Gm28043E0CXC2 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Gm28043E0CXC2 Olfr129-201ENSMUST00000122318 993 ntBASIC15.46■□□□□ 0.07
Gm28043E0CXC2 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Gm28043E0CXC2 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Gm28043E0CXC2 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.46■□□□□ 0.07
Gm28043E0CXC2 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Gm28043E0CXC2 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Gm28043E0CXC2 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Gm28043E0CXC2 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Gm28043E0CXC2 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Gm28043E0CXC2 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Gm28043E0CXC2 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Gm28043E0CXC2 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Gm28043E0CXC2 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Gm28043E0CXC2 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
Gm28043E0CXC2 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Gm28043E0CXC2 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Gm28043E0CXC2 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Gm28043E0CXC2 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Gm28043E0CXC2 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Gm28043E0CXC2 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Gm28043E0CXC2 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
Gm28043E0CXC2 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Gm28043E0CXC2 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Gm28043E0CXC2 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.45■□□□□ 0.06
Gm28043E0CXC2 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Gm28043E0CXC2 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Gm28043E0CXC2 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Gm28043E0CXC2 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.45■□□□□ 0.06
Gm28043E0CXC2 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Gm28043E0CXC2 Gm14859-201ENSMUST00000117752 357 ntBASIC15.45■□□□□ 0.06
Gm28043E0CXC2 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Gm28043E0CXC2 Gm13312-201ENSMUST00000119631 718 ntBASIC15.45■□□□□ 0.06
Gm28043E0CXC2 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Gm28043E0CXC2 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.45■□□□□ 0.06
Gm28043E0CXC2 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC15.45■□□□□ 0.06
Gm28043E0CXC2 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Gm28043E0CXC2 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Gm28043E0CXC2 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Gm28043E0CXC2 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Gm28043E0CXC2 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.45■□□□□ 0.06
Gm28043E0CXC2 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Gm28043E0CXC2 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Gm28043E0CXC2 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Gm28043E0CXC2 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Gm28043E0CXC2 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Gm28043E0CXC2 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gm28043E0CXC2 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Gm28043E0CXC2 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gm28043E0CXC2 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gm28043E0CXC2 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gm28043E0CXC2 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms