Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Gm16476-201ENSMUST00000221544 139 ntBASIC21.34■■□□□ 1.01
Hfm1D3Z4R1 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Hfm1D3Z4R1 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Hfm1D3Z4R1 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Hfm1D3Z4R1 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Hfm1D3Z4R1 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Hfm1D3Z4R1 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
Hfm1D3Z4R1 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Hfm1D3Z4R1 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Hfm1D3Z4R1 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Hfm1D3Z4R1 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Hfm1D3Z4R1 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC21.33■■□□□ 1.01
Hfm1D3Z4R1 Gm3436-201ENSMUST00000179930 840 ntBASIC21.33■■□□□ 1.01
Hfm1D3Z4R1 Gm44719-201ENSMUST00000206404 149 ntBASIC21.33■■□□□ 1.01
Hfm1D3Z4R1 Gm45668-201ENSMUST00000211271 493 ntBASIC21.33■■□□□ 1.01
Hfm1D3Z4R1 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Hfm1D3Z4R1 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Hfm1D3Z4R1 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Hfm1D3Z4R1 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Hfm1D3Z4R1 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Hfm1D3Z4R1 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC21.33■■□□□ 1
Hfm1D3Z4R1 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Hfm1D3Z4R1 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Hfm1D3Z4R1 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC21.32■■□□□ 1
Hfm1D3Z4R1 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Hfm1D3Z4R1 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Hfm1D3Z4R1 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Hfm1D3Z4R1 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC21.32■■□□□ 1
Hfm1D3Z4R1 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Hfm1D3Z4R1 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Hfm1D3Z4R1 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC21.32■■□□□ 1
Hfm1D3Z4R1 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC21.32■■□□□ 1
Hfm1D3Z4R1 Gm5479-201ENSMUST00000160578 435 ntBASIC21.32■■□□□ 1
Hfm1D3Z4R1 Mir7085-201ENSMUST00000184353 66 ntBASIC21.32■■□□□ 1
Hfm1D3Z4R1 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
Hfm1D3Z4R1 Gm42612-201ENSMUST00000197986 623 ntBASIC21.32■■□□□ 1
Hfm1D3Z4R1 Gm18018-201ENSMUST00000198273 408 ntBASIC21.32■■□□□ 1
Hfm1D3Z4R1 Gm43170-201ENSMUST00000199827 612 ntBASIC21.32■■□□□ 1
Hfm1D3Z4R1 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC21.32■■□□□ 1
Hfm1D3Z4R1 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Hfm1D3Z4R1 Gm20445-201ENSMUST00000061905 565 ntBASIC21.32■■□□□ 1
Hfm1D3Z4R1 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC21.32■■□□□ 1
Hfm1D3Z4R1 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC21.32■■□□□ 1
Hfm1D3Z4R1 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Hfm1D3Z4R1 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Hfm1D3Z4R1 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Hfm1D3Z4R1 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Hfm1D3Z4R1 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
Hfm1D3Z4R1 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC21.32■■□□□ 1
Hfm1D3Z4R1 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Hfm1D3Z4R1 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Hfm1D3Z4R1 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Hfm1D3Z4R1 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Hfm1D3Z4R1 Gm6756-201ENSMUST00000180647 1620 ntBASIC21.31■■□□□ 1
Hfm1D3Z4R1 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Hfm1D3Z4R1 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Hfm1D3Z4R1 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC21.31■■□□□ 1
Hfm1D3Z4R1 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC21.31■■□□□ 1
Hfm1D3Z4R1 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC21.31■■□□□ 1
Hfm1D3Z4R1 Mir1897-201ENSMUST00000122581 272 ntBASIC21.31■■□□□ 1
Hfm1D3Z4R1 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC21.31■■□□□ 1
Hfm1D3Z4R1 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Hfm1D3Z4R1 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC21.31■■□□□ 1
Hfm1D3Z4R1 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC21.31■■□□□ 1
Hfm1D3Z4R1 Gm37748-201ENSMUST00000194379 1140 ntBASIC21.31■■□□□ 1
Hfm1D3Z4R1 Gm46209-201ENSMUST00000217912 553 ntBASIC21.31■■□□□ 1
Hfm1D3Z4R1 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Hfm1D3Z4R1 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC21.31■■□□□ 1
Hfm1D3Z4R1 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC21.31■■□□□ 1
Hfm1D3Z4R1 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Hfm1D3Z4R1 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Hfm1D3Z4R1 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Hfm1D3Z4R1 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Hfm1D3Z4R1 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Hfm1D3Z4R1 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Hfm1D3Z4R1 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC21.31■■□□□ 1
Hfm1D3Z4R1 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Hfm1D3Z4R1 Ldb3-207ENSMUST00000227819 1499 ntBASIC21.31■■□□□ 1
Hfm1D3Z4R1 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Hfm1D3Z4R1 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Hfm1D3Z4R1 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hfm1D3Z4R1 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC21.3■■□□□ 1
Hfm1D3Z4R1 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC21.3■■□□□ 1
Hfm1D3Z4R1 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC21.3■■□□□ 1
Hfm1D3Z4R1 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC21.3■■□□□ 1
Hfm1D3Z4R1 Gm29310-201ENSMUST00000185468 696 ntBASIC21.3■■□□□ 1
Hfm1D3Z4R1 Gm21825-201ENSMUST00000185728 696 ntBASIC21.3■■□□□ 1
Hfm1D3Z4R1 Gm29109-201ENSMUST00000185895 696 ntBASIC21.3■■□□□ 1
Hfm1D3Z4R1 Gm21896-201ENSMUST00000186520 696 ntBASIC21.3■■□□□ 1
Hfm1D3Z4R1 Gm21873-201ENSMUST00000186728 696 ntBASIC21.3■■□□□ 1
Hfm1D3Z4R1 Gm21794-201ENSMUST00000187056 696 ntBASIC21.3■■□□□ 1
Hfm1D3Z4R1 Gm21880-201ENSMUST00000187275 696 ntBASIC21.3■■□□□ 1
Hfm1D3Z4R1 Gm21826-201ENSMUST00000187451 696 ntBASIC21.3■■□□□ 1
Hfm1D3Z4R1 Gm21198-201ENSMUST00000188393 696 ntBASIC21.3■■□□□ 1
Hfm1D3Z4R1 Gm21749-201ENSMUST00000189343 696 ntBASIC21.3■■□□□ 1
Hfm1D3Z4R1 Gm21901-201ENSMUST00000189568 696 ntBASIC21.3■■□□□ 1
Hfm1D3Z4R1 Gm29424-201ENSMUST00000189716 696 ntBASIC21.3■■□□□ 1
Hfm1D3Z4R1 Gm28599-201ENSMUST00000189838 694 ntBASIC21.3■■□□□ 1
Hfm1D3Z4R1 Gm21867-201ENSMUST00000189917 696 ntBASIC21.3■■□□□ 1
Hfm1D3Z4R1 Gm29269-201ENSMUST00000190087 696 ntBASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms