Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Gm24270-201ENSMUST00000102326 57 ntBASIC20.77■□□□□ 0.92
Tmf1B9EKI3 Gm24245-201ENSMUST00000157318 57 ntBASIC20.77■□□□□ 0.92
Tmf1B9EKI3 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC20.77■□□□□ 0.92
Tmf1B9EKI3 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Tmf1B9EKI3 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Tmf1B9EKI3 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tmf1B9EKI3 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tmf1B9EKI3 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tmf1B9EKI3 Gm42901-201ENSMUST00000197735 3171 ntBASIC20.77■□□□□ 0.92
Tmf1B9EKI3 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tmf1B9EKI3 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tmf1B9EKI3 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Tmf1B9EKI3 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Tmf1B9EKI3 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Tmf1B9EKI3 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Tmf1B9EKI3 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC20.76■□□□□ 0.91
Tmf1B9EKI3 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC20.76■□□□□ 0.91
Tmf1B9EKI3 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC20.76■□□□□ 0.91
Tmf1B9EKI3 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tmf1B9EKI3 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tmf1B9EKI3 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tmf1B9EKI3 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tmf1B9EKI3 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tmf1B9EKI3 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Tmf1B9EKI3 Mir3113-201ENSMUST00000175478 76 ntBASIC20.76■□□□□ 0.91
Tmf1B9EKI3 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Tmf1B9EKI3 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Tmf1B9EKI3 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Tmf1B9EKI3 AC174742.1-201ENSMUST00000218272 304 ntBASIC20.76■□□□□ 0.91
Tmf1B9EKI3 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tmf1B9EKI3 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tmf1B9EKI3 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tmf1B9EKI3 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC20.76■□□□□ 0.91
Tmf1B9EKI3 AC130669.1-201ENSMUST00000228537 1672 ntBASIC20.76■□□□□ 0.91
Tmf1B9EKI3 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tmf1B9EKI3 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tmf1B9EKI3 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC20.76■□□□□ 0.91
Tmf1B9EKI3 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tmf1B9EKI3 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tmf1B9EKI3 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tmf1B9EKI3 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tmf1B9EKI3 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tmf1B9EKI3 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tmf1B9EKI3 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tmf1B9EKI3 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC20.75■□□□□ 0.91
Tmf1B9EKI3 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tmf1B9EKI3 Gm10175-201ENSMUST00000086013 645 ntBASIC20.75■□□□□ 0.91
Tmf1B9EKI3 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tmf1B9EKI3 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Tmf1B9EKI3 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tmf1B9EKI3 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tmf1B9EKI3 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Tmf1B9EKI3 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Tmf1B9EKI3 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tmf1B9EKI3 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tmf1B9EKI3 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tmf1B9EKI3 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tmf1B9EKI3 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tmf1B9EKI3 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC20.74■□□□□ 0.91
Tmf1B9EKI3 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tmf1B9EKI3 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tmf1B9EKI3 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tmf1B9EKI3 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Tmf1B9EKI3 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC20.74■□□□□ 0.91
Tmf1B9EKI3 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tmf1B9EKI3 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC20.74■□□□□ 0.91
Tmf1B9EKI3 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC20.74■□□□□ 0.91
Tmf1B9EKI3 Gm10576-201ENSMUST00000191927 825 ntBASIC20.74■□□□□ 0.91
Tmf1B9EKI3 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tmf1B9EKI3 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC20.74■□□□□ 0.91
Tmf1B9EKI3 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Tmf1B9EKI3 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tmf1B9EKI3 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tmf1B9EKI3 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Tmf1B9EKI3 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Tmf1B9EKI3 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tmf1B9EKI3 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tmf1B9EKI3 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tmf1B9EKI3 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tmf1B9EKI3 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tmf1B9EKI3 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tmf1B9EKI3 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
Tmf1B9EKI3 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC20.73■□□□□ 0.91
Tmf1B9EKI3 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC20.73■□□□□ 0.91
Tmf1B9EKI3 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC20.73■□□□□ 0.91
Tmf1B9EKI3 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC20.73■□□□□ 0.91
Tmf1B9EKI3 Gm17968-201ENSMUST00000194902 784 ntBASIC20.73■□□□□ 0.91
Tmf1B9EKI3 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Tmf1B9EKI3 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tmf1B9EKI3 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Tmf1B9EKI3 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tmf1B9EKI3 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tmf1B9EKI3 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Tmf1B9EKI3 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tmf1B9EKI3 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC20.72■□□□□ 0.91
Tmf1B9EKI3 Gm12008-201ENSMUST00000117791 755 ntBASIC20.72■□□□□ 0.91
Tmf1B9EKI3 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC20.72■□□□□ 0.91
Tmf1B9EKI3 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tmf1B9EKI3 Gm5177-201ENSMUST00000183092 997 ntBASIC20.72■□□□□ 0.91
Tmf1B9EKI3 Mir7036b-201ENSMUST00000184791 63 ntBASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms