Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm12887B1AVM1 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm12887B1AVM1 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm12887B1AVM1 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm12887B1AVM1 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm12887B1AVM1 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm12887B1AVM1 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm12887B1AVM1 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm12887B1AVM1 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm12887B1AVM1 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm12887B1AVM1 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Gm12887B1AVM1 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Gm12887B1AVM1 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm12887B1AVM1 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC12.47□□□□□ -0.41
Gm12887B1AVM1 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.47□□□□□ -0.41
Gm12887B1AVM1 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Gm12887B1AVM1 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC12.47□□□□□ -0.41
Gm12887B1AVM1 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC12.47□□□□□ -0.41
Gm12887B1AVM1 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC12.47□□□□□ -0.41
Gm12887B1AVM1 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Gm12887B1AVM1 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC12.47□□□□□ -0.41
Gm12887B1AVM1 Gm7367-201ENSMUST00000057611 492 ntBASIC12.47□□□□□ -0.41
Gm12887B1AVM1 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Gm12887B1AVM1 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm12887B1AVM1 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm12887B1AVM1 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gm12887B1AVM1 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.47□□□□□ -0.41
Gm12887B1AVM1 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm12887B1AVM1 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm12887B1AVM1 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm12887B1AVM1 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm12887B1AVM1 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gm12887B1AVM1 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Gm12887B1AVM1 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gm12887B1AVM1 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Gm12887B1AVM1 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gm12887B1AVM1 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gm12887B1AVM1 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gm12887B1AVM1 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gm12887B1AVM1 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Gm12887B1AVM1 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Gm12887B1AVM1 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gm12887B1AVM1 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Gm12887B1AVM1 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gm12887B1AVM1 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Gm12887B1AVM1 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Gm12887B1AVM1 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gm12887B1AVM1 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC12.46□□□□□ -0.41
Gm12887B1AVM1 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Gm12887B1AVM1 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC12.46□□□□□ -0.41
Gm12887B1AVM1 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC12.46□□□□□ -0.41
Gm12887B1AVM1 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC12.46□□□□□ -0.41
Gm12887B1AVM1 AC153881.1-201ENSMUST00000214448 284 ntBASIC12.46□□□□□ -0.41
Gm12887B1AVM1 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Gm12887B1AVM1 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gm12887B1AVM1 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gm12887B1AVM1 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gm12887B1AVM1 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gm12887B1AVM1 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.46□□□□□ -0.42
Gm12887B1AVM1 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gm12887B1AVM1 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gm12887B1AVM1 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gm12887B1AVM1 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gm12887B1AVM1 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gm12887B1AVM1 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gm12887B1AVM1 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.46□□□□□ -0.42
Gm12887B1AVM1 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gm12887B1AVM1 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gm12887B1AVM1 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gm12887B1AVM1 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gm12887B1AVM1 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gm12887B1AVM1 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gm12887B1AVM1 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Gm12887B1AVM1 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm12887B1AVM1 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm12887B1AVM1 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
Gm12887B1AVM1 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm12887B1AVM1 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm12887B1AVM1 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm12887B1AVM1 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Gm12887B1AVM1 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm12887B1AVM1 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm12887B1AVM1 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm12887B1AVM1 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm12887B1AVM1 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm12887B1AVM1 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm12887B1AVM1 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm12887B1AVM1 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.45□□□□□ -0.42
Gm12887B1AVM1 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm12887B1AVM1 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Gm12887B1AVM1 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm12887B1AVM1 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm12887B1AVM1 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC12.45□□□□□ -0.42
Gm12887B1AVM1 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC12.45□□□□□ -0.42
Gm12887B1AVM1 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
Gm12887B1AVM1 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC12.45□□□□□ -0.42
Gm12887B1AVM1 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm12887B1AVM1 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.45□□□□□ -0.42
Gm12887B1AVM1 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Gm12887B1AVM1 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms