Protein–RNA interactions for Protein: B1ARV6

Pramef20, PRAME family member 20, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pramef20B1ARV6 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pramef20B1ARV6 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pramef20B1ARV6 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pramef20B1ARV6 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pramef20B1ARV6 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
Pramef20B1ARV6 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Pramef20B1ARV6 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pramef20B1ARV6 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pramef20B1ARV6 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Pramef20B1ARV6 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pramef20B1ARV6 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pramef20B1ARV6 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Pramef20B1ARV6 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.23■□□□□ 0.03
Pramef20B1ARV6 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pramef20B1ARV6 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Pramef20B1ARV6 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Pramef20B1ARV6 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.23■□□□□ 0.03
Pramef20B1ARV6 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pramef20B1ARV6 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pramef20B1ARV6 Gm15173-201ENSMUST00000122049 433 ntBASIC15.23■□□□□ 0.03
Pramef20B1ARV6 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Pramef20B1ARV6 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.23■□□□□ 0.03
Pramef20B1ARV6 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.23■□□□□ 0.03
Pramef20B1ARV6 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pramef20B1ARV6 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Pramef20B1ARV6 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pramef20B1ARV6 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pramef20B1ARV6 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pramef20B1ARV6 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pramef20B1ARV6 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pramef20B1ARV6 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pramef20B1ARV6 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pramef20B1ARV6 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Pramef20B1ARV6 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Pramef20B1ARV6 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pramef20B1ARV6 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pramef20B1ARV6 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.22■□□□□ 0.03
Pramef20B1ARV6 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.22■□□□□ 0.03
Pramef20B1ARV6 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Pramef20B1ARV6 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pramef20B1ARV6 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pramef20B1ARV6 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Pramef20B1ARV6 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pramef20B1ARV6 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pramef20B1ARV6 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.22■□□□□ 0.03
Pramef20B1ARV6 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pramef20B1ARV6 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.22■□□□□ 0.03
Pramef20B1ARV6 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
Pramef20B1ARV6 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pramef20B1ARV6 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pramef20B1ARV6 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pramef20B1ARV6 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.22■□□□□ 0.03
Pramef20B1ARV6 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pramef20B1ARV6 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.22■□□□□ 0.03
Pramef20B1ARV6 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.22■□□□□ 0.03
Pramef20B1ARV6 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.22■□□□□ 0.03
Pramef20B1ARV6 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pramef20B1ARV6 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pramef20B1ARV6 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pramef20B1ARV6 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pramef20B1ARV6 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Pramef20B1ARV6 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pramef20B1ARV6 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pramef20B1ARV6 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pramef20B1ARV6 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pramef20B1ARV6 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pramef20B1ARV6 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pramef20B1ARV6 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pramef20B1ARV6 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pramef20B1ARV6 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pramef20B1ARV6 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pramef20B1ARV6 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pramef20B1ARV6 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pramef20B1ARV6 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pramef20B1ARV6 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Pramef20B1ARV6 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pramef20B1ARV6 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pramef20B1ARV6 Gm8097-201ENSMUST00000117903 829 ntBASIC15.21■□□□□ 0.03
Pramef20B1ARV6 Gm4459-201ENSMUST00000118750 468 ntBASIC15.21■□□□□ 0.03
Pramef20B1ARV6 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pramef20B1ARV6 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.21■□□□□ 0.03
Pramef20B1ARV6 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pramef20B1ARV6 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pramef20B1ARV6 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pramef20B1ARV6 Gm8000-201ENSMUST00000188378 592 ntBASIC15.21■□□□□ 0.03
Pramef20B1ARV6 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pramef20B1ARV6 Gm5364-201ENSMUST00000216789 889 ntBASIC15.21■□□□□ 0.03
Pramef20B1ARV6 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pramef20B1ARV6 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pramef20B1ARV6 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pramef20B1ARV6 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pramef20B1ARV6 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Pramef20B1ARV6 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Pramef20B1ARV6 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pramef20B1ARV6 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pramef20B1ARV6 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Pramef20B1ARV6 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pramef20B1ARV6 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.2■□□□□ 0.02
Pramef20B1ARV6 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pramef20B1ARV6 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms