Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC7.99□□□□□ -1.13
Ubr4A2AN08 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Ubr4A2AN08 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Ubr4A2AN08 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Ubr4A2AN08 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC7.99□□□□□ -1.13
Ubr4A2AN08 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Ubr4A2AN08 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC7.99□□□□□ -1.13
Ubr4A2AN08 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Ubr4A2AN08 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
Ubr4A2AN08 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Ubr4A2AN08 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Ubr4A2AN08 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Ubr4A2AN08 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC7.99□□□□□ -1.13
Ubr4A2AN08 Gm38000-201ENSMUST00000192390 1215 ntBASIC7.99□□□□□ -1.13
Ubr4A2AN08 Ighv1-62-201ENSMUST00000193406 350 ntBASIC7.99□□□□□ -1.13
Ubr4A2AN08 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC7.99□□□□□ -1.13
Ubr4A2AN08 AC141438.2-201ENSMUST00000215068 271 ntBASIC7.99□□□□□ -1.13
Ubr4A2AN08 AC156501.1-201ENSMUST00000228219 270 ntBASIC7.99□□□□□ -1.13
Ubr4A2AN08 AC135114.1-201ENSMUST00000228682 270 ntBASIC7.99□□□□□ -1.13
Ubr4A2AN08 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Ubr4A2AN08 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC7.99□□□□□ -1.13
Ubr4A2AN08 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
Ubr4A2AN08 Gm11543-201ENSMUST00000120758 370 ntBASIC7.99□□□□□ -1.13
Ubr4A2AN08 Gm3222-201ENSMUST00000071282 990 ntBASIC7.99□□□□□ -1.13
Ubr4A2AN08 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
Ubr4A2AN08 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Ubr4A2AN08 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Ubr4A2AN08 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Ubr4A2AN08 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Ubr4A2AN08 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Ubr4A2AN08 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
Ubr4A2AN08 Gm24543-201ENSMUST00000103867 82 ntBASIC7.99□□□□□ -1.13
Ubr4A2AN08 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Ubr4A2AN08 Gm13342-201ENSMUST00000121055 207 ntBASIC7.99□□□□□ -1.13
Ubr4A2AN08 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC7.99□□□□□ -1.13
Ubr4A2AN08 Mir1943-201ENSMUST00000158276 73 ntBASIC7.99□□□□□ -1.13
Ubr4A2AN08 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Ubr4A2AN08 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ubr4A2AN08 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ubr4A2AN08 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ubr4A2AN08 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ubr4A2AN08 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ubr4A2AN08 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Ubr4A2AN08 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ubr4A2AN08 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ubr4A2AN08 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ubr4A2AN08 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Ubr4A2AN08 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Ubr4A2AN08 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Ubr4A2AN08 Gm43610-201ENSMUST00000199117 365 ntBASIC7.98□□□□□ -1.13
Ubr4A2AN08 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ubr4A2AN08 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ubr4A2AN08 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC7.98□□□□□ -1.13
Ubr4A2AN08 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC7.98□□□□□ -1.13
Ubr4A2AN08 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ubr4A2AN08 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC7.98□□□□□ -1.13
Ubr4A2AN08 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Ubr4A2AN08 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC7.98□□□□□ -1.13
Ubr4A2AN08 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Ubr4A2AN08 Gm45219-201ENSMUST00000205602 465 ntBASIC7.98□□□□□ -1.13
Ubr4A2AN08 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC7.98□□□□□ -1.13
Ubr4A2AN08 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Ubr4A2AN08 Gm40466-201ENSMUST00000212174 422 ntBASIC7.98□□□□□ -1.13
Ubr4A2AN08 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC7.98□□□□□ -1.13
Ubr4A2AN08 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ubr4A2AN08 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ubr4A2AN08 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC7.98□□□□□ -1.13
Ubr4A2AN08 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ubr4A2AN08 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ubr4A2AN08 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Ubr4A2AN08 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Ubr4A2AN08 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ubr4A2AN08 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Ubr4A2AN08 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC7.98□□□□□ -1.13
Ubr4A2AN08 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Ubr4A2AN08 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Ubr4A2AN08 Gm11814-201ENSMUST00000119515 929 ntBASIC7.98□□□□□ -1.13
Ubr4A2AN08 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC7.98□□□□□ -1.13
Ubr4A2AN08 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
Ubr4A2AN08 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC7.98□□□□□ -1.13
Ubr4A2AN08 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC7.98□□□□□ -1.13
Ubr4A2AN08 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ubr4A2AN08 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Ubr4A2AN08 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ubr4A2AN08 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ubr4A2AN08 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Ubr4A2AN08 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ubr4A2AN08 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Ubr4A2AN08 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC7.98□□□□□ -1.13
Ubr4A2AN08 Gm20392-201ENSMUST00000173047 701 ntBASIC7.98□□□□□ -1.13
Ubr4A2AN08 Gm34767-201ENSMUST00000191813 1062 ntBASIC7.98□□□□□ -1.13
Ubr4A2AN08 Gm43758-201ENSMUST00000199500 367 ntBASIC7.98□□□□□ -1.13
Ubr4A2AN08 Gm8463-201ENSMUST00000208573 613 ntBASIC7.98□□□□□ -1.13
Ubr4A2AN08 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ubr4A2AN08 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Ubr4A2AN08 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ubr4A2AN08 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Ubr4A2AN08 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Ubr4A2AN08 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Ubr4A2AN08 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms