Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhgb8A0A140LI48 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Pcdhgb8A0A140LI48 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhgb8A0A140LI48 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhgb8A0A140LI48 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
Pcdhgb8A0A140LI48 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhgb8A0A140LI48 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.95□□□□□ -0.18
Pcdhgb8A0A140LI48 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Pcdhgb8A0A140LI48 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhgb8A0A140LI48 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhgb8A0A140LI48 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Pcdhgb8A0A140LI48 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhgb8A0A140LI48 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhgb8A0A140LI48 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhgb8A0A140LI48 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhgb8A0A140LI48 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhgb8A0A140LI48 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Pcdhgb8A0A140LI48 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhgb8A0A140LI48 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhgb8A0A140LI48 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhgb8A0A140LI48 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhgb8A0A140LI48 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Pcdhgb8A0A140LI48 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhgb8A0A140LI48 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhgb8A0A140LI48 Gm15372-201ENSMUST00000120729 834 ntBASIC13.94□□□□□ -0.18
Pcdhgb8A0A140LI48 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13.94□□□□□ -0.18
Pcdhgb8A0A140LI48 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Pcdhgb8A0A140LI48 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC13.94□□□□□ -0.18
Pcdhgb8A0A140LI48 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhgb8A0A140LI48 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Pcdhgb8A0A140LI48 AC153889.1-201ENSMUST00000219257 330 ntBASIC13.94□□□□□ -0.18
Pcdhgb8A0A140LI48 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhgb8A0A140LI48 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhgb8A0A140LI48 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhgb8A0A140LI48 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhgb8A0A140LI48 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
Pcdhgb8A0A140LI48 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhgb8A0A140LI48 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.94□□□□□ -0.18
Pcdhgb8A0A140LI48 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhgb8A0A140LI48 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhgb8A0A140LI48 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhgb8A0A140LI48 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhgb8A0A140LI48 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Pcdhgb8A0A140LI48 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhgb8A0A140LI48 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhgb8A0A140LI48 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.93□□□□□ -0.18
Pcdhgb8A0A140LI48 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.93□□□□□ -0.18
Pcdhgb8A0A140LI48 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Pcdhgb8A0A140LI48 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhgb8A0A140LI48 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhgb8A0A140LI48 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhgb8A0A140LI48 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Pcdhgb8A0A140LI48 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhgb8A0A140LI48 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Pcdhgb8A0A140LI48 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhgb8A0A140LI48 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhgb8A0A140LI48 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Pcdhgb8A0A140LI48 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.93□□□□□ -0.18
Pcdhgb8A0A140LI48 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Pcdhgb8A0A140LI48 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhgb8A0A140LI48 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhgb8A0A140LI48 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhgb8A0A140LI48 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Pcdhgb8A0A140LI48 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Pcdhgb8A0A140LI48 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhgb8A0A140LI48 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhgb8A0A140LI48 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhgb8A0A140LI48 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhgb8A0A140LI48 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.93□□□□□ -0.18
Pcdhgb8A0A140LI48 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhgb8A0A140LI48 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC13.93□□□□□ -0.18
Pcdhgb8A0A140LI48 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhgb8A0A140LI48 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.93□□□□□ -0.18
Pcdhgb8A0A140LI48 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhgb8A0A140LI48 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.92□□□□□ -0.18
Pcdhgb8A0A140LI48 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhgb8A0A140LI48 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhgb8A0A140LI48 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhgb8A0A140LI48 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhgb8A0A140LI48 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhgb8A0A140LI48 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Pcdhgb8A0A140LI48 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhgb8A0A140LI48 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Pcdhgb8A0A140LI48 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhgb8A0A140LI48 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.92□□□□□ -0.18
Pcdhgb8A0A140LI48 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhgb8A0A140LI48 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhgb8A0A140LI48 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Pcdhgb8A0A140LI48 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhgb8A0A140LI48 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhgb8A0A140LI48 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhgb8A0A140LI48 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhgb8A0A140LI48 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhgb8A0A140LI48 Rprl3-201ENSMUST00000157400 290 ntBASIC13.92□□□□□ -0.18
Pcdhgb8A0A140LI48 Gm10052-201ENSMUST00000168019 960 ntBASIC13.92□□□□□ -0.18
Pcdhgb8A0A140LI48 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC13.92□□□□□ -0.18
Pcdhgb8A0A140LI48 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhgb8A0A140LI48 Gm7729-201ENSMUST00000050143 801 ntBASIC13.92□□□□□ -0.18
Pcdhgb8A0A140LI48 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Pcdhgb8A0A140LI48 Spr-ps1-201ENSMUST00000089584 605 ntBASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms