Protein–RNA interactions for Protein: A0A0N4SVP8

Gm5580, Predicted pseudogene 5580, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5580A0A0N4SVP8 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm5580A0A0N4SVP8 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm5580A0A0N4SVP8 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm5580A0A0N4SVP8 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.78■□□□□ 0.28
Gm5580A0A0N4SVP8 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm5580A0A0N4SVP8 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Gm5580A0A0N4SVP8 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm5580A0A0N4SVP8 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm5580A0A0N4SVP8 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.78■□□□□ 0.28
Gm5580A0A0N4SVP8 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm5580A0A0N4SVP8 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Gm5580A0A0N4SVP8 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm5580A0A0N4SVP8 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Gm5580A0A0N4SVP8 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Gm5580A0A0N4SVP8 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
Gm5580A0A0N4SVP8 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.78■□□□□ 0.28
Gm5580A0A0N4SVP8 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm5580A0A0N4SVP8 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm5580A0A0N4SVP8 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm5580A0A0N4SVP8 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm5580A0A0N4SVP8 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm5580A0A0N4SVP8 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm5580A0A0N4SVP8 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm5580A0A0N4SVP8 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm5580A0A0N4SVP8 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm5580A0A0N4SVP8 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm5580A0A0N4SVP8 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Gm5580A0A0N4SVP8 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Gm5580A0A0N4SVP8 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Gm5580A0A0N4SVP8 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Gm5580A0A0N4SVP8 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gm5580A0A0N4SVP8 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Gm5580A0A0N4SVP8 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gm5580A0A0N4SVP8 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gm5580A0A0N4SVP8 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gm5580A0A0N4SVP8 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gm5580A0A0N4SVP8 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gm5580A0A0N4SVP8 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.77■□□□□ 0.28
Gm5580A0A0N4SVP8 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gm5580A0A0N4SVP8 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Gm5580A0A0N4SVP8 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.77■□□□□ 0.28
Gm5580A0A0N4SVP8 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.77■□□□□ 0.28
Gm5580A0A0N4SVP8 Mir3081-201ENSMUST00000175305 84 ntBASIC16.77■□□□□ 0.28
Gm5580A0A0N4SVP8 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Gm5580A0A0N4SVP8 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Gm5580A0A0N4SVP8 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gm5580A0A0N4SVP8 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Gm5580A0A0N4SVP8 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.77■□□□□ 0.28
Gm5580A0A0N4SVP8 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gm5580A0A0N4SVP8 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Gm5580A0A0N4SVP8 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gm5580A0A0N4SVP8 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gm5580A0A0N4SVP8 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.77■□□□□ 0.27
Gm5580A0A0N4SVP8 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
Gm5580A0A0N4SVP8 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.27
Gm5580A0A0N4SVP8 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Gm5580A0A0N4SVP8 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Gm5580A0A0N4SVP8 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Gm5580A0A0N4SVP8 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Gm5580A0A0N4SVP8 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Gm5580A0A0N4SVP8 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Gm5580A0A0N4SVP8 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm5580A0A0N4SVP8 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Gm5580A0A0N4SVP8 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm5580A0A0N4SVP8 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm5580A0A0N4SVP8 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Gm5580A0A0N4SVP8 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm5580A0A0N4SVP8 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.76■□□□□ 0.27
Gm5580A0A0N4SVP8 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm5580A0A0N4SVP8 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.76■□□□□ 0.27
Gm5580A0A0N4SVP8 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Gm5580A0A0N4SVP8 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm5580A0A0N4SVP8 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm5580A0A0N4SVP8 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.76■□□□□ 0.27
Gm5580A0A0N4SVP8 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.76■□□□□ 0.27
Gm5580A0A0N4SVP8 Gm44454-201ENSMUST00000198541 138 ntBASIC16.76■□□□□ 0.27
Gm5580A0A0N4SVP8 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Gm5580A0A0N4SVP8 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.76■□□□□ 0.27
Gm5580A0A0N4SVP8 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.76■□□□□ 0.27
Gm5580A0A0N4SVP8 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Gm5580A0A0N4SVP8 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm5580A0A0N4SVP8 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Gm5580A0A0N4SVP8 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Gm5580A0A0N4SVP8 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm5580A0A0N4SVP8 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm5580A0A0N4SVP8 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm5580A0A0N4SVP8 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm5580A0A0N4SVP8 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Gm5580A0A0N4SVP8 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm5580A0A0N4SVP8 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Gm5580A0A0N4SVP8 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm5580A0A0N4SVP8 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm5580A0A0N4SVP8 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Gm5580A0A0N4SVP8 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm5580A0A0N4SVP8 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Gm5580A0A0N4SVP8 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Gm5580A0A0N4SVP8 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.75■□□□□ 0.27
Gm5580A0A0N4SVP8 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.75■□□□□ 0.27
Gm5580A0A0N4SVP8 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm5580A0A0N4SVP8 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms