Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC18.68■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Best4-ps-201ENSMUST00000129783 1380 ntBASIC18.68■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Atg4a-psA0A0G2JFS9 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC18.67■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC18.67■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Gm27628-201ENSMUST00000184911 107 ntBASIC18.67■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Gm15590-201ENSMUST00000078419 552 ntBASIC18.67■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC18.67■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Gm13034-201ENSMUST00000121342 3177 ntBASIC18.67■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC18.67■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC18.67■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC18.67■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC18.66■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Gm8242-201ENSMUST00000193029 1420 ntBASIC18.66■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC18.66■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC18.66■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Gm43935-201ENSMUST00000203569 1050 ntBASIC18.65■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Atg4a-psA0A0G2JFS9 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Gm6184-201ENSMUST00000120403 1261 ntBASIC18.64■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Atg4a-psA0A0G2JFS9 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC18.64■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC18.64■□□□□ 0.57
Atg4a-psA0A0G2JFS9 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC18.64■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Gm18195-201ENSMUST00000207604 706 ntBASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms