Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Trav8-1A0A075B641 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Trav8-1A0A075B641 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav8-1A0A075B641 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav8-1A0A075B641 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav8-1A0A075B641 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Trav8-1A0A075B641 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav8-1A0A075B641 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav8-1A0A075B641 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav8-1A0A075B641 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav8-1A0A075B641 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC11.08□□□□□ -0.64
Trav8-1A0A075B641 Gm14464-201ENSMUST00000119658 1254 ntBASIC11.08□□□□□ -0.64
Trav8-1A0A075B641 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav8-1A0A075B641 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC11.08□□□□□ -0.64
Trav8-1A0A075B641 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav8-1A0A075B641 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav8-1A0A075B641 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav8-1A0A075B641 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav8-1A0A075B641 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav8-1A0A075B641 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav8-1A0A075B641 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav8-1A0A075B641 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav8-1A0A075B641 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav8-1A0A075B641 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC11.08□□□□□ -0.64
Trav8-1A0A075B641 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav8-1A0A075B641 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav8-1A0A075B641 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav8-1A0A075B641 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav8-1A0A075B641 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav8-1A0A075B641 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Trav8-1A0A075B641 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav8-1A0A075B641 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav8-1A0A075B641 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav8-1A0A075B641 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav8-1A0A075B641 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav8-1A0A075B641 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav8-1A0A075B641 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav8-1A0A075B641 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav8-1A0A075B641 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav8-1A0A075B641 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC11.07□□□□□ -0.64
Trav8-1A0A075B641 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav8-1A0A075B641 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav8-1A0A075B641 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav8-1A0A075B641 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav8-1A0A075B641 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC11.07□□□□□ -0.64
Trav8-1A0A075B641 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav8-1A0A075B641 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav8-1A0A075B641 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav8-1A0A075B641 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav8-1A0A075B641 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav8-1A0A075B641 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav8-1A0A075B641 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav8-1A0A075B641 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.07□□□□□ -0.64
Trav8-1A0A075B641 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC11.07□□□□□ -0.64
Trav8-1A0A075B641 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav8-1A0A075B641 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav8-1A0A075B641 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC11.07□□□□□ -0.64
Trav8-1A0A075B641 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav8-1A0A075B641 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav8-1A0A075B641 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC11.07□□□□□ -0.64
Trav8-1A0A075B641 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC11.07□□□□□ -0.64
Trav8-1A0A075B641 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav8-1A0A075B641 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav8-1A0A075B641 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Trav8-1A0A075B641 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav8-1A0A075B641 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav8-1A0A075B641 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Trav8-1A0A075B641 Gm37691-201ENSMUST00000192147 2573 ntBASIC11.07□□□□□ -0.64
Trav8-1A0A075B641 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Trav8-1A0A075B641 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav8-1A0A075B641 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav8-1A0A075B641 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav8-1A0A075B641 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav8-1A0A075B641 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav8-1A0A075B641 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav8-1A0A075B641 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav8-1A0A075B641 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav8-1A0A075B641 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav8-1A0A075B641 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav8-1A0A075B641 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav8-1A0A075B641 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav8-1A0A075B641 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav8-1A0A075B641 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Trav8-1A0A075B641 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav8-1A0A075B641 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav8-1A0A075B641 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.06□□□□□ -0.64
Trav8-1A0A075B641 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav8-1A0A075B641 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC11.06□□□□□ -0.64
Trav8-1A0A075B641 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav8-1A0A075B641 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav8-1A0A075B641 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav8-1A0A075B641 Gm37292-201ENSMUST00000192062 758 ntBASIC11.06□□□□□ -0.64
Trav8-1A0A075B641 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC11.06□□□□□ -0.64
Trav8-1A0A075B641 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC11.06□□□□□ -0.64
Trav8-1A0A075B641 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav8-1A0A075B641 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav8-1A0A075B641 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav8-1A0A075B641 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav8-1A0A075B641 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav8-1A0A075B641 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms