Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16nA0A075B634 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16nA0A075B634 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16nA0A075B634 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16nA0A075B634 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16nA0A075B634 Gm8784-201ENSMUST00000222096 1435 ntBASIC11.67□□□□□ -0.54
Trav16nA0A075B634 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16nA0A075B634 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16nA0A075B634 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16nA0A075B634 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16nA0A075B634 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav16nA0A075B634 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Trav16nA0A075B634 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16nA0A075B634 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16nA0A075B634 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16nA0A075B634 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16nA0A075B634 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trav16nA0A075B634 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16nA0A075B634 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16nA0A075B634 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC11.66□□□□□ -0.54
Trav16nA0A075B634 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16nA0A075B634 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav16nA0A075B634 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16nA0A075B634 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16nA0A075B634 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trav16nA0A075B634 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16nA0A075B634 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16nA0A075B634 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16nA0A075B634 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC11.66□□□□□ -0.54
Trav16nA0A075B634 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav16nA0A075B634 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16nA0A075B634 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16nA0A075B634 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav16nA0A075B634 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16nA0A075B634 Mir1668-201ENSMUST00000184114 107 ntBASIC11.66□□□□□ -0.54
Trav16nA0A075B634 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC11.66□□□□□ -0.54
Trav16nA0A075B634 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16nA0A075B634 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16nA0A075B634 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16nA0A075B634 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16nA0A075B634 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trav16nA0A075B634 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav16nA0A075B634 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16nA0A075B634 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16nA0A075B634 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16nA0A075B634 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16nA0A075B634 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16nA0A075B634 Gm37728-201ENSMUST00000195025 2292 ntBASIC11.66□□□□□ -0.54
Trav16nA0A075B634 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16nA0A075B634 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16nA0A075B634 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16nA0A075B634 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16nA0A075B634 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16nA0A075B634 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16nA0A075B634 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16nA0A075B634 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav16nA0A075B634 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16nA0A075B634 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16nA0A075B634 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16nA0A075B634 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16nA0A075B634 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16nA0A075B634 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16nA0A075B634 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16nA0A075B634 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16nA0A075B634 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16nA0A075B634 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16nA0A075B634 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16nA0A075B634 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trav16nA0A075B634 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC11.65□□□□□ -0.54
Trav16nA0A075B634 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16nA0A075B634 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC11.65□□□□□ -0.54
Trav16nA0A075B634 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Trav16nA0A075B634 Arhgef33-211ENSMUST00000225658 473 ntBASIC11.65□□□□□ -0.54
Trav16nA0A075B634 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC11.65□□□□□ -0.54
Trav16nA0A075B634 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16nA0A075B634 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16nA0A075B634 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16nA0A075B634 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav16nA0A075B634 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16nA0A075B634 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
Trav16nA0A075B634 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16nA0A075B634 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16nA0A075B634 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16nA0A075B634 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16nA0A075B634 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav16nA0A075B634 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16nA0A075B634 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav16nA0A075B634 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav16nA0A075B634 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav16nA0A075B634 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Trav16nA0A075B634 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Trav16nA0A075B634 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav16nA0A075B634 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav16nA0A075B634 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC11.64□□□□□ -0.55
Trav16nA0A075B634 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16nA0A075B634 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16nA0A075B634 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16nA0A075B634 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16nA0A075B634 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16nA0A075B634 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms