Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav9-1A0A075B601 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9-1A0A075B601 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9-1A0A075B601 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9-1A0A075B601 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9-1A0A075B601 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9-1A0A075B601 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Trav9-1A0A075B601 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC12.04□□□□□ -0.48
Trav9-1A0A075B601 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav9-1A0A075B601 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.04□□□□□ -0.48
Trav9-1A0A075B601 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9-1A0A075B601 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9-1A0A075B601 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9-1A0A075B601 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9-1A0A075B601 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9-1A0A075B601 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9-1A0A075B601 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trav9-1A0A075B601 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9-1A0A075B601 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9-1A0A075B601 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9-1A0A075B601 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9-1A0A075B601 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9-1A0A075B601 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav9-1A0A075B601 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9-1A0A075B601 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9-1A0A075B601 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9-1A0A075B601 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9-1A0A075B601 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9-1A0A075B601 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9-1A0A075B601 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9-1A0A075B601 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9-1A0A075B601 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9-1A0A075B601 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9-1A0A075B601 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trav9-1A0A075B601 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9-1A0A075B601 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9-1A0A075B601 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.03□□□□□ -0.48
Trav9-1A0A075B601 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9-1A0A075B601 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Trav9-1A0A075B601 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav9-1A0A075B601 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9-1A0A075B601 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trav9-1A0A075B601 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Trav9-1A0A075B601 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9-1A0A075B601 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9-1A0A075B601 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav9-1A0A075B601 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Trav9-1A0A075B601 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9-1A0A075B601 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav9-1A0A075B601 Mir3081-201ENSMUST00000175305 84 ntBASIC12.03□□□□□ -0.48
Trav9-1A0A075B601 Gm27742-201ENSMUST00000184667 60 ntBASIC12.03□□□□□ -0.48
Trav9-1A0A075B601 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav9-1A0A075B601 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9-1A0A075B601 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9-1A0A075B601 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9-1A0A075B601 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9-1A0A075B601 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9-1A0A075B601 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9-1A0A075B601 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9-1A0A075B601 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9-1A0A075B601 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9-1A0A075B601 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9-1A0A075B601 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9-1A0A075B601 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9-1A0A075B601 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9-1A0A075B601 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9-1A0A075B601 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav9-1A0A075B601 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9-1A0A075B601 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9-1A0A075B601 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9-1A0A075B601 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav9-1A0A075B601 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav9-1A0A075B601 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav9-1A0A075B601 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav9-1A0A075B601 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.48
Trav9-1A0A075B601 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9-1A0A075B601 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9-1A0A075B601 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav9-1A0A075B601 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.02□□□□□ -0.49
Trav9-1A0A075B601 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC12.02□□□□□ -0.49
Trav9-1A0A075B601 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Trav9-1A0A075B601 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.02□□□□□ -0.49
Trav9-1A0A075B601 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.02□□□□□ -0.49
Trav9-1A0A075B601 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.02□□□□□ -0.49
Trav9-1A0A075B601 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.02□□□□□ -0.49
Trav9-1A0A075B601 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.02□□□□□ -0.49
Trav9-1A0A075B601 Rprl3-201ENSMUST00000157400 290 ntBASIC12.02□□□□□ -0.49
Trav9-1A0A075B601 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.02□□□□□ -0.49
Trav9-1A0A075B601 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.02□□□□□ -0.49
Trav9-1A0A075B601 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.02□□□□□ -0.49
Trav9-1A0A075B601 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.02□□□□□ -0.49
Trav9-1A0A075B601 Gm8825-201ENSMUST00000182565 998 ntBASIC12.02□□□□□ -0.49
Trav9-1A0A075B601 Gm4518-201ENSMUST00000182638 718 ntBASIC12.02□□□□□ -0.49
Trav9-1A0A075B601 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.02□□□□□ -0.49
Trav9-1A0A075B601 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.02□□□□□ -0.49
Trav9-1A0A075B601 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.02□□□□□ -0.49
Trav9-1A0A075B601 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9-1A0A075B601 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.02□□□□□ -0.49
Trav9-1A0A075B601 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.02□□□□□ -0.49
Trav9-1A0A075B601 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms