Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
PdfS4R2K0 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
PdfS4R2K0 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
PdfS4R2K0 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
PdfS4R2K0 AC163637.1-201ENSMUST00000215491 1894 ntBASIC11.86□□□□□ -0.51
PdfS4R2K0 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
PdfS4R2K0 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
PdfS4R2K0 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
PdfS4R2K0 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
PdfS4R2K0 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
PdfS4R2K0 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
PdfS4R2K0 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
PdfS4R2K0 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
PdfS4R2K0 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
PdfS4R2K0 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
PdfS4R2K0 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
PdfS4R2K0 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
PdfS4R2K0 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
PdfS4R2K0 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
PdfS4R2K0 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC11.85□□□□□ -0.51
PdfS4R2K0 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC11.85□□□□□ -0.51
PdfS4R2K0 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
PdfS4R2K0 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
PdfS4R2K0 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
PdfS4R2K0 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
PdfS4R2K0 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
PdfS4R2K0 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
PdfS4R2K0 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
PdfS4R2K0 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
PdfS4R2K0 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
PdfS4R2K0 Gm6190-201ENSMUST00000220683 1374 ntBASIC11.85□□□□□ -0.51
PdfS4R2K0 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC11.85□□□□□ -0.51
PdfS4R2K0 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
PdfS4R2K0 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
PdfS4R2K0 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC11.85□□□□□ -0.51
PdfS4R2K0 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
PdfS4R2K0 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC11.85□□□□□ -0.51
PdfS4R2K0 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
PdfS4R2K0 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
PdfS4R2K0 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
PdfS4R2K0 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
PdfS4R2K0 Gm27528-202ENSMUST00000222916 2012 ntBASIC11.85□□□□□ -0.51
PdfS4R2K0 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
PdfS4R2K0 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
PdfS4R2K0 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
PdfS4R2K0 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
PdfS4R2K0 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC11.85□□□□□ -0.51
PdfS4R2K0 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
PdfS4R2K0 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC11.85□□□□□ -0.51
PdfS4R2K0 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
PdfS4R2K0 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
PdfS4R2K0 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC11.85□□□□□ -0.51
PdfS4R2K0 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
PdfS4R2K0 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
PdfS4R2K0 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
PdfS4R2K0 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PdfS4R2K0 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
PdfS4R2K0 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PdfS4R2K0 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PdfS4R2K0 Gm43697-201ENSMUST00000199637 2581 ntBASIC11.84□□□□□ -0.51
PdfS4R2K0 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PdfS4R2K0 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
PdfS4R2K0 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PdfS4R2K0 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PdfS4R2K0 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PdfS4R2K0 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PdfS4R2K0 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
PdfS4R2K0 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
PdfS4R2K0 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
PdfS4R2K0 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
PdfS4R2K0 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PdfS4R2K0 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
PdfS4R2K0 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
PdfS4R2K0 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
PdfS4R2K0 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
PdfS4R2K0 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
PdfS4R2K0 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
PdfS4R2K0 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC11.84□□□□□ -0.51
PdfS4R2K0 Mir1668-201ENSMUST00000184114 107 ntBASIC11.84□□□□□ -0.51
PdfS4R2K0 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC11.84□□□□□ -0.51
PdfS4R2K0 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
PdfS4R2K0 Gm18032-201ENSMUST00000222541 538 ntBASIC11.84□□□□□ -0.51
PdfS4R2K0 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PdfS4R2K0 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC11.84□□□□□ -0.51
PdfS4R2K0 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PdfS4R2K0 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PdfS4R2K0 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC11.84□□□□□ -0.51
PdfS4R2K0 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
PdfS4R2K0 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PdfS4R2K0 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PdfS4R2K0 Gm45760-201ENSMUST00000212190 1782 ntBASIC11.84□□□□□ -0.51
PdfS4R2K0 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC11.84□□□□□ -0.51
PdfS4R2K0 AC174678.1-201ENSMUST00000228007 2749 ntBASIC11.84□□□□□ -0.51
PdfS4R2K0 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
PdfS4R2K0 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PdfS4R2K0 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
PdfS4R2K0 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC11.84□□□□□ -0.51
PdfS4R2K0 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PdfS4R2K0 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
PdfS4R2K0 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms