Protein–RNA interactions for Protein: Q9Z104

Hmg20b, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20bQ9Z104 Gm37500-201ENSMUST00000192059 1443 ntBASIC18.16■□□□□ 0.5
Hmg20bQ9Z104 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmg20bQ9Z104 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmg20bQ9Z104 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Hmg20bQ9Z104 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmg20bQ9Z104 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmg20bQ9Z104 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmg20bQ9Z104 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18.16■□□□□ 0.5
Hmg20bQ9Z104 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC18.16■□□□□ 0.5
Hmg20bQ9Z104 Gm18489-201ENSMUST00000172565 551 ntBASIC18.16■□□□□ 0.5
Hmg20bQ9Z104 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC18.16■□□□□ 0.5
Hmg20bQ9Z104 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Hmg20bQ9Z104 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmg20bQ9Z104 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmg20bQ9Z104 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmg20bQ9Z104 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmg20bQ9Z104 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmg20bQ9Z104 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmg20bQ9Z104 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Hmg20bQ9Z104 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmg20bQ9Z104 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmg20bQ9Z104 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmg20bQ9Z104 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmg20bQ9Z104 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hmg20bQ9Z104 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmg20bQ9Z104 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmg20bQ9Z104 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hmg20bQ9Z104 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Hmg20bQ9Z104 Gm7222-201ENSMUST00000117512 906 ntBASIC18.15■□□□□ 0.5
Hmg20bQ9Z104 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Hmg20bQ9Z104 Gm7230-201ENSMUST00000173026 815 ntBASIC18.15■□□□□ 0.5
Hmg20bQ9Z104 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Hmg20bQ9Z104 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hmg20bQ9Z104 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmg20bQ9Z104 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmg20bQ9Z104 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmg20bQ9Z104 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmg20bQ9Z104 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmg20bQ9Z104 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmg20bQ9Z104 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmg20bQ9Z104 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hmg20bQ9Z104 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmg20bQ9Z104 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmg20bQ9Z104 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmg20bQ9Z104 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Hmg20bQ9Z104 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC18.14■□□□□ 0.5
Hmg20bQ9Z104 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hmg20bQ9Z104 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Hmg20bQ9Z104 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Hmg20bQ9Z104 Gm7901-201ENSMUST00000120430 1597 ntBASIC18.14■□□□□ 0.49
Hmg20bQ9Z104 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Hmg20bQ9Z104 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hmg20bQ9Z104 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC18.14■□□□□ 0.49
Hmg20bQ9Z104 Gm11185-201ENSMUST00000117732 1007 ntBASIC18.14■□□□□ 0.49
Hmg20bQ9Z104 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC18.14■□□□□ 0.49
Hmg20bQ9Z104 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC18.14■□□□□ 0.49
Hmg20bQ9Z104 Gm37153-201ENSMUST00000193637 231 ntBASIC18.14■□□□□ 0.49
Hmg20bQ9Z104 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Hmg20bQ9Z104 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hmg20bQ9Z104 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hmg20bQ9Z104 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hmg20bQ9Z104 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Hmg20bQ9Z104 Gm45212-201ENSMUST00000205831 3403 ntBASIC18.14■□□□□ 0.49
Hmg20bQ9Z104 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hmg20bQ9Z104 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
Hmg20bQ9Z104 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Hmg20bQ9Z104 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hmg20bQ9Z104 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Hmg20bQ9Z104 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hmg20bQ9Z104 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hmg20bQ9Z104 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC18.13■□□□□ 0.49
Hmg20bQ9Z104 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hmg20bQ9Z104 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hmg20bQ9Z104 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hmg20bQ9Z104 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hmg20bQ9Z104 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hmg20bQ9Z104 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hmg20bQ9Z104 Gm45293-201ENSMUST00000209754 1812 ntBASIC18.13■□□□□ 0.49
Hmg20bQ9Z104 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Hmg20bQ9Z104 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Hmg20bQ9Z104 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hmg20bQ9Z104 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Hmg20bQ9Z104 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Hmg20bQ9Z104 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Hmg20bQ9Z104 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hmg20bQ9Z104 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC18.12■□□□□ 0.49
Hmg20bQ9Z104 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC18.12■□□□□ 0.49
Hmg20bQ9Z104 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Hmg20bQ9Z104 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hmg20bQ9Z104 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Hmg20bQ9Z104 Gm7862-201ENSMUST00000121461 292 ntBASIC18.12■□□□□ 0.49
Hmg20bQ9Z104 Gm5682-201ENSMUST00000173402 505 ntBASIC18.12■□□□□ 0.49
Hmg20bQ9Z104 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC18.12■□□□□ 0.49
Hmg20bQ9Z104 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hmg20bQ9Z104 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Hmg20bQ9Z104 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hmg20bQ9Z104 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hmg20bQ9Z104 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hmg20bQ9Z104 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Hmg20bQ9Z104 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 97.9 ms