Protein–RNA interactions for Protein: Q9WU28

Pfdn5, Prefoldin subunit 5, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn5Q9WU28 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn5Q9WU28 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn5Q9WU28 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn5Q9WU28 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn5Q9WU28 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC12.67□□□□□ -0.38
Pfdn5Q9WU28 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn5Q9WU28 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn5Q9WU28 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC12.67□□□□□ -0.38
Pfdn5Q9WU28 AC135637.1-201ENSMUST00000227750 365 ntBASIC12.67□□□□□ -0.38
Pfdn5Q9WU28 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn5Q9WU28 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn5Q9WU28 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn5Q9WU28 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn5Q9WU28 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC12.67□□□□□ -0.38
Pfdn5Q9WU28 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn5Q9WU28 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.67□□□□□ -0.38
Pfdn5Q9WU28 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn5Q9WU28 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Pfdn5Q9WU28 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn5Q9WU28 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn5Q9WU28 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn5Q9WU28 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC12.66□□□□□ -0.38
Pfdn5Q9WU28 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn5Q9WU28 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Pfdn5Q9WU28 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn5Q9WU28 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn5Q9WU28 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn5Q9WU28 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Pfdn5Q9WU28 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn5Q9WU28 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn5Q9WU28 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn5Q9WU28 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC12.66□□□□□ -0.38
Pfdn5Q9WU28 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn5Q9WU28 Gm10698-201ENSMUST00000182663 604 ntBASIC12.66□□□□□ -0.38
Pfdn5Q9WU28 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn5Q9WU28 AC164629.5-201ENSMUST00000220387 632 ntBASIC12.66□□□□□ -0.38
Pfdn5Q9WU28 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn5Q9WU28 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn5Q9WU28 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn5Q9WU28 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn5Q9WU28 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn5Q9WU28 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn5Q9WU28 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn5Q9WU28 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn5Q9WU28 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn5Q9WU28 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn5Q9WU28 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.66□□□□□ -0.38
Pfdn5Q9WU28 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn5Q9WU28 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Pfdn5Q9WU28 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn5Q9WU28 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn5Q9WU28 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn5Q9WU28 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn5Q9WU28 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn5Q9WU28 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn5Q9WU28 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn5Q9WU28 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn5Q9WU28 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn5Q9WU28 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC12.65□□□□□ -0.38
Pfdn5Q9WU28 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn5Q9WU28 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn5Q9WU28 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn5Q9WU28 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.65□□□□□ -0.38
Pfdn5Q9WU28 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn5Q9WU28 Zfp264-201ENSMUST00000208656 1563 ntBASIC12.65□□□□□ -0.38
Pfdn5Q9WU28 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn5Q9WU28 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn5Q9WU28 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn5Q9WU28 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn5Q9WU28 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Pfdn5Q9WU28 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn5Q9WU28 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn5Q9WU28 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn5Q9WU28 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Pfdn5Q9WU28 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn5Q9WU28 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn5Q9WU28 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn5Q9WU28 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn5Q9WU28 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn5Q9WU28 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn5Q9WU28 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn5Q9WU28 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn5Q9WU28 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn5Q9WU28 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn5Q9WU28 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn5Q9WU28 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.65□□□□□ -0.38
Pfdn5Q9WU28 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn5Q9WU28 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn5Q9WU28 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn5Q9WU28 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn5Q9WU28 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn5Q9WU28 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Pfdn5Q9WU28 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn5Q9WU28 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn5Q9WU28 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn5Q9WU28 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Pfdn5Q9WU28 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Pfdn5Q9WU28 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Pfdn5Q9WU28 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.39
Pfdn5Q9WU28 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms