Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.55□□□□□ -0.24
Nubp1Q9R060 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nubp1Q9R060 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nubp1Q9R060 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.55□□□□□ -0.24
Nubp1Q9R060 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Nubp1Q9R060 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Nubp1Q9R060 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nubp1Q9R060 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.55□□□□□ -0.24
Nubp1Q9R060 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.55□□□□□ -0.24
Nubp1Q9R060 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Nubp1Q9R060 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nubp1Q9R060 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nubp1Q9R060 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nubp1Q9R060 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nubp1Q9R060 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nubp1Q9R060 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nubp1Q9R060 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nubp1Q9R060 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nubp1Q9R060 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.54□□□□□ -0.24
Nubp1Q9R060 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nubp1Q9R060 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nubp1Q9R060 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nubp1Q9R060 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
Nubp1Q9R060 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Nubp1Q9R060 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nubp1Q9R060 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nubp1Q9R060 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.54□□□□□ -0.24
Nubp1Q9R060 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nubp1Q9R060 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Nubp1Q9R060 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nubp1Q9R060 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.54□□□□□ -0.24
Nubp1Q9R060 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC13.54□□□□□ -0.24
Nubp1Q9R060 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC13.54□□□□□ -0.24
Nubp1Q9R060 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Nubp1Q9R060 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nubp1Q9R060 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.54□□□□□ -0.24
Nubp1Q9R060 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nubp1Q9R060 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC13.54□□□□□ -0.24
Nubp1Q9R060 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nubp1Q9R060 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nubp1Q9R060 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nubp1Q9R060 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.54□□□□□ -0.24
Nubp1Q9R060 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nubp1Q9R060 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nubp1Q9R060 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Nubp1Q9R060 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nubp1Q9R060 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nubp1Q9R060 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nubp1Q9R060 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nubp1Q9R060 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nubp1Q9R060 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nubp1Q9R060 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nubp1Q9R060 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nubp1Q9R060 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Nubp1Q9R060 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nubp1Q9R060 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nubp1Q9R060 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nubp1Q9R060 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nubp1Q9R060 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.53□□□□□ -0.24
Nubp1Q9R060 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nubp1Q9R060 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.53□□□□□ -0.24
Nubp1Q9R060 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Nubp1Q9R060 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nubp1Q9R060 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nubp1Q9R060 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nubp1Q9R060 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nubp1Q9R060 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nubp1Q9R060 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nubp1Q9R060 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nubp1Q9R060 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nubp1Q9R060 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Nubp1Q9R060 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Nubp1Q9R060 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nubp1Q9R060 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nubp1Q9R060 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.53□□□□□ -0.24
Nubp1Q9R060 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nubp1Q9R060 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nubp1Q9R060 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Nubp1Q9R060 Gm4899-201ENSMUST00000178708 719 ntBASIC13.53□□□□□ -0.24
Nubp1Q9R060 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nubp1Q9R060 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nubp1Q9R060 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Nubp1Q9R060 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nubp1Q9R060 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nubp1Q9R060 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nubp1Q9R060 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Nubp1Q9R060 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nubp1Q9R060 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.53□□□□□ -0.24
Nubp1Q9R060 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nubp1Q9R060 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nubp1Q9R060 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.53□□□□□ -0.24
Nubp1Q9R060 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nubp1Q9R060 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nubp1Q9R060 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nubp1Q9R060 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nubp1Q9R060 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nubp1Q9R060 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nubp1Q9R060 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.52□□□□□ -0.24
Nubp1Q9R060 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.52□□□□□ -0.24
Nubp1Q9R060 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms