Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clcf1Q9QZM3 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.01□□□□□ -0.17
Clcf1Q9QZM3 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clcf1Q9QZM3 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clcf1Q9QZM3 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clcf1Q9QZM3 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Clcf1Q9QZM3 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clcf1Q9QZM3 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clcf1Q9QZM3 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clcf1Q9QZM3 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Clcf1Q9QZM3 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clcf1Q9QZM3 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clcf1Q9QZM3 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clcf1Q9QZM3 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clcf1Q9QZM3 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Clcf1Q9QZM3 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clcf1Q9QZM3 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clcf1Q9QZM3 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Clcf1Q9QZM3 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clcf1Q9QZM3 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
Clcf1Q9QZM3 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Clcf1Q9QZM3 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14□□□□□ -0.17
Clcf1Q9QZM3 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Clcf1Q9QZM3 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Clcf1Q9QZM3 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clcf1Q9QZM3 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14□□□□□ -0.17
Clcf1Q9QZM3 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14□□□□□ -0.17
Clcf1Q9QZM3 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clcf1Q9QZM3 Gm6550-201ENSMUST00000187574 993 ntBASIC14□□□□□ -0.17
Clcf1Q9QZM3 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clcf1Q9QZM3 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14□□□□□ -0.17
Clcf1Q9QZM3 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clcf1Q9QZM3 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Clcf1Q9QZM3 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Clcf1Q9QZM3 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Clcf1Q9QZM3 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clcf1Q9QZM3 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Clcf1Q9QZM3 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clcf1Q9QZM3 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clcf1Q9QZM3 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clcf1Q9QZM3 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clcf1Q9QZM3 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clcf1Q9QZM3 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Clcf1Q9QZM3 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clcf1Q9QZM3 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Clcf1Q9QZM3 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clcf1Q9QZM3 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clcf1Q9QZM3 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clcf1Q9QZM3 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clcf1Q9QZM3 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clcf1Q9QZM3 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clcf1Q9QZM3 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Clcf1Q9QZM3 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.99□□□□□ -0.17
Clcf1Q9QZM3 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clcf1Q9QZM3 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clcf1Q9QZM3 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clcf1Q9QZM3 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clcf1Q9QZM3 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Clcf1Q9QZM3 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Clcf1Q9QZM3 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.99□□□□□ -0.17
Clcf1Q9QZM3 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC13.99□□□□□ -0.17
Clcf1Q9QZM3 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.99□□□□□ -0.17
Clcf1Q9QZM3 Gm18206-201ENSMUST00000207027 926 ntBASIC13.99□□□□□ -0.17
Clcf1Q9QZM3 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
Clcf1Q9QZM3 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clcf1Q9QZM3 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clcf1Q9QZM3 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clcf1Q9QZM3 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clcf1Q9QZM3 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Clcf1Q9QZM3 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clcf1Q9QZM3 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Clcf1Q9QZM3 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clcf1Q9QZM3 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clcf1Q9QZM3 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clcf1Q9QZM3 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clcf1Q9QZM3 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clcf1Q9QZM3 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clcf1Q9QZM3 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clcf1Q9QZM3 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clcf1Q9QZM3 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clcf1Q9QZM3 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Clcf1Q9QZM3 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clcf1Q9QZM3 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
Clcf1Q9QZM3 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clcf1Q9QZM3 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.98□□□□□ -0.17
Clcf1Q9QZM3 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Clcf1Q9QZM3 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clcf1Q9QZM3 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clcf1Q9QZM3 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clcf1Q9QZM3 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clcf1Q9QZM3 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clcf1Q9QZM3 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clcf1Q9QZM3 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clcf1Q9QZM3 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Clcf1Q9QZM3 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.98□□□□□ -0.17
Clcf1Q9QZM3 Gm1401-201ENSMUST00000122048 772 ntBASIC13.98□□□□□ -0.17
Clcf1Q9QZM3 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Clcf1Q9QZM3 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clcf1Q9QZM3 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.98□□□□□ -0.17
Clcf1Q9QZM3 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms