Protein–RNA interactions for Protein: Q9QXZ7

Nr2e3, Photoreceptor-specific nuclear receptor, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr2e3Q9QXZ7 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nr2e3Q9QXZ7 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nr2e3Q9QXZ7 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Nr2e3Q9QXZ7 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nr2e3Q9QXZ7 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nr2e3Q9QXZ7 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.41■□□□□ 0.38
Nr2e3Q9QXZ7 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nr2e3Q9QXZ7 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nr2e3Q9QXZ7 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nr2e3Q9QXZ7 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nr2e3Q9QXZ7 AC157650.3-201ENSMUST00000225058 1476 ntBASIC17.41■□□□□ 0.38
Nr2e3Q9QXZ7 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nr2e3Q9QXZ7 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nr2e3Q9QXZ7 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nr2e3Q9QXZ7 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nr2e3Q9QXZ7 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nr2e3Q9QXZ7 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nr2e3Q9QXZ7 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nr2e3Q9QXZ7 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nr2e3Q9QXZ7 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Nr2e3Q9QXZ7 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Nr2e3Q9QXZ7 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nr2e3Q9QXZ7 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nr2e3Q9QXZ7 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Nr2e3Q9QXZ7 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nr2e3Q9QXZ7 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nr2e3Q9QXZ7 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nr2e3Q9QXZ7 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC17.4■□□□□ 0.38
Nr2e3Q9QXZ7 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nr2e3Q9QXZ7 Gm11453-201ENSMUST00000117318 1007 ntBASIC17.4■□□□□ 0.38
Nr2e3Q9QXZ7 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nr2e3Q9QXZ7 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nr2e3Q9QXZ7 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nr2e3Q9QXZ7 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
Nr2e3Q9QXZ7 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Nr2e3Q9QXZ7 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Nr2e3Q9QXZ7 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nr2e3Q9QXZ7 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nr2e3Q9QXZ7 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nr2e3Q9QXZ7 Asic1-205ENSMUST00000228185 1818 ntBASIC17.4■□□□□ 0.38
Nr2e3Q9QXZ7 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nr2e3Q9QXZ7 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Nr2e3Q9QXZ7 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nr2e3Q9QXZ7 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nr2e3Q9QXZ7 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nr2e3Q9QXZ7 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.39■□□□□ 0.37
Nr2e3Q9QXZ7 Gm5184-201ENSMUST00000220417 1702 ntBASIC17.39■□□□□ 0.37
Nr2e3Q9QXZ7 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nr2e3Q9QXZ7 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Nr2e3Q9QXZ7 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nr2e3Q9QXZ7 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.39■□□□□ 0.37
Nr2e3Q9QXZ7 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.39■□□□□ 0.37
Nr2e3Q9QXZ7 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nr2e3Q9QXZ7 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.39■□□□□ 0.37
Nr2e3Q9QXZ7 Gm44771-201ENSMUST00000206975 626 ntBASIC17.39■□□□□ 0.37
Nr2e3Q9QXZ7 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.39■□□□□ 0.37
Nr2e3Q9QXZ7 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nr2e3Q9QXZ7 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nr2e3Q9QXZ7 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nr2e3Q9QXZ7 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nr2e3Q9QXZ7 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nr2e3Q9QXZ7 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nr2e3Q9QXZ7 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nr2e3Q9QXZ7 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nr2e3Q9QXZ7 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nr2e3Q9QXZ7 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nr2e3Q9QXZ7 Best4-ps-201ENSMUST00000129783 1380 ntBASIC17.39■□□□□ 0.37
Nr2e3Q9QXZ7 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nr2e3Q9QXZ7 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nr2e3Q9QXZ7 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr2e3Q9QXZ7 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Nr2e3Q9QXZ7 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC17.38■□□□□ 0.37
Nr2e3Q9QXZ7 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr2e3Q9QXZ7 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr2e3Q9QXZ7 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr2e3Q9QXZ7 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr2e3Q9QXZ7 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr2e3Q9QXZ7 Gm7901-201ENSMUST00000120430 1597 ntBASIC17.38■□□□□ 0.37
Nr2e3Q9QXZ7 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Nr2e3Q9QXZ7 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.38■□□□□ 0.37
Nr2e3Q9QXZ7 Gm7556-201ENSMUST00000201178 1084 ntBASIC17.38■□□□□ 0.37
Nr2e3Q9QXZ7 Gm7787-201ENSMUST00000216858 688 ntBASIC17.38■□□□□ 0.37
Nr2e3Q9QXZ7 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr2e3Q9QXZ7 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr2e3Q9QXZ7 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr2e3Q9QXZ7 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr2e3Q9QXZ7 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nr2e3Q9QXZ7 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr2e3Q9QXZ7 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr2e3Q9QXZ7 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr2e3Q9QXZ7 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nr2e3Q9QXZ7 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr2e3Q9QXZ7 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr2e3Q9QXZ7 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.37■□□□□ 0.37
Nr2e3Q9QXZ7 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.37■□□□□ 0.37
Nr2e3Q9QXZ7 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.37■□□□□ 0.37
Nr2e3Q9QXZ7 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.37■□□□□ 0.37
Nr2e3Q9QXZ7 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr2e3Q9QXZ7 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr2e3Q9QXZ7 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms