Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chaf1aQ9QWF0 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chaf1aQ9QWF0 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chaf1aQ9QWF0 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Chaf1aQ9QWF0 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.28■□□□□ 0.36
Chaf1aQ9QWF0 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Chaf1aQ9QWF0 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.28■□□□□ 0.36
Chaf1aQ9QWF0 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.28■□□□□ 0.36
Chaf1aQ9QWF0 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Chaf1aQ9QWF0 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chaf1aQ9QWF0 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chaf1aQ9QWF0 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Chaf1aQ9QWF0 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chaf1aQ9QWF0 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chaf1aQ9QWF0 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Chaf1aQ9QWF0 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chaf1aQ9QWF0 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chaf1aQ9QWF0 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Chaf1aQ9QWF0 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chaf1aQ9QWF0 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chaf1aQ9QWF0 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chaf1aQ9QWF0 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Chaf1aQ9QWF0 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.27■□□□□ 0.36
Chaf1aQ9QWF0 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chaf1aQ9QWF0 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chaf1aQ9QWF0 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Chaf1aQ9QWF0 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chaf1aQ9QWF0 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
Chaf1aQ9QWF0 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chaf1aQ9QWF0 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Chaf1aQ9QWF0 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chaf1aQ9QWF0 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chaf1aQ9QWF0 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC17.27■□□□□ 0.36
Chaf1aQ9QWF0 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chaf1aQ9QWF0 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.27■□□□□ 0.36
Chaf1aQ9QWF0 Gm6257-201ENSMUST00000163864 910 ntBASIC17.27■□□□□ 0.36
Chaf1aQ9QWF0 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.27■□□□□ 0.36
Chaf1aQ9QWF0 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.27■□□□□ 0.36
Chaf1aQ9QWF0 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chaf1aQ9QWF0 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.27■□□□□ 0.36
Chaf1aQ9QWF0 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chaf1aQ9QWF0 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chaf1aQ9QWF0 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chaf1aQ9QWF0 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Chaf1aQ9QWF0 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chaf1aQ9QWF0 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chaf1aQ9QWF0 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chaf1aQ9QWF0 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chaf1aQ9QWF0 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chaf1aQ9QWF0 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chaf1aQ9QWF0 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Chaf1aQ9QWF0 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Chaf1aQ9QWF0 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chaf1aQ9QWF0 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Chaf1aQ9QWF0 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chaf1aQ9QWF0 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chaf1aQ9QWF0 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Chaf1aQ9QWF0 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chaf1aQ9QWF0 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.26■□□□□ 0.35
Chaf1aQ9QWF0 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Chaf1aQ9QWF0 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Chaf1aQ9QWF0 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Chaf1aQ9QWF0 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Chaf1aQ9QWF0 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chaf1aQ9QWF0 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC17.26■□□□□ 0.35
Chaf1aQ9QWF0 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chaf1aQ9QWF0 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chaf1aQ9QWF0 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC17.26■□□□□ 0.35
Chaf1aQ9QWF0 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Chaf1aQ9QWF0 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chaf1aQ9QWF0 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chaf1aQ9QWF0 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chaf1aQ9QWF0 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chaf1aQ9QWF0 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chaf1aQ9QWF0 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chaf1aQ9QWF0 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Chaf1aQ9QWF0 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.25■□□□□ 0.35
Chaf1aQ9QWF0 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chaf1aQ9QWF0 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Chaf1aQ9QWF0 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chaf1aQ9QWF0 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Chaf1aQ9QWF0 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Chaf1aQ9QWF0 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chaf1aQ9QWF0 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chaf1aQ9QWF0 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chaf1aQ9QWF0 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chaf1aQ9QWF0 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Chaf1aQ9QWF0 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Chaf1aQ9QWF0 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Chaf1aQ9QWF0 Gm6659-201ENSMUST00000174752 547 ntBASIC17.25■□□□□ 0.35
Chaf1aQ9QWF0 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.25■□□□□ 0.35
Chaf1aQ9QWF0 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chaf1aQ9QWF0 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Chaf1aQ9QWF0 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chaf1aQ9QWF0 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chaf1aQ9QWF0 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chaf1aQ9QWF0 Grk6-207ENSMUST00000225925 2769 ntBASIC17.25■□□□□ 0.35
Chaf1aQ9QWF0 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chaf1aQ9QWF0 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Chaf1aQ9QWF0 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms