Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Crlf1Q9JM58 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.33□□□□□ -0.44
Crlf1Q9JM58 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Crlf1Q9JM58 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Crlf1Q9JM58 Gm15487-201ENSMUST00000122373 465 ntBASIC12.33□□□□□ -0.44
Crlf1Q9JM58 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.33□□□□□ -0.44
Crlf1Q9JM58 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.33□□□□□ -0.44
Crlf1Q9JM58 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Crlf1Q9JM58 Gm9063-201ENSMUST00000223299 582 ntBASIC12.33□□□□□ -0.44
Crlf1Q9JM58 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.33□□□□□ -0.44
Crlf1Q9JM58 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.33□□□□□ -0.44
Crlf1Q9JM58 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Crlf1Q9JM58 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Crlf1Q9JM58 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Crlf1Q9JM58 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Crlf1Q9JM58 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Crlf1Q9JM58 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Crlf1Q9JM58 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Crlf1Q9JM58 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Crlf1Q9JM58 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Crlf1Q9JM58 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Crlf1Q9JM58 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Crlf1Q9JM58 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Crlf1Q9JM58 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Crlf1Q9JM58 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Crlf1Q9JM58 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Crlf1Q9JM58 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Crlf1Q9JM58 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Crlf1Q9JM58 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Crlf1Q9JM58 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Crlf1Q9JM58 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Crlf1Q9JM58 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Crlf1Q9JM58 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Crlf1Q9JM58 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Crlf1Q9JM58 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Crlf1Q9JM58 Gm11478-201ENSMUST00000117851 599 ntBASIC12.32□□□□□ -0.44
Crlf1Q9JM58 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.32□□□□□ -0.44
Crlf1Q9JM58 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.32□□□□□ -0.44
Crlf1Q9JM58 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.32□□□□□ -0.44
Crlf1Q9JM58 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.32□□□□□ -0.44
Crlf1Q9JM58 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Crlf1Q9JM58 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Crlf1Q9JM58 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Crlf1Q9JM58 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Crlf1Q9JM58 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Crlf1Q9JM58 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Crlf1Q9JM58 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Crlf1Q9JM58 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Crlf1Q9JM58 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Crlf1Q9JM58 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.32□□□□□ -0.44
Crlf1Q9JM58 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Crlf1Q9JM58 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Crlf1Q9JM58 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Crlf1Q9JM58 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Crlf1Q9JM58 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Crlf1Q9JM58 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Crlf1Q9JM58 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Crlf1Q9JM58 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Crlf1Q9JM58 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Crlf1Q9JM58 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Crlf1Q9JM58 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Crlf1Q9JM58 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC12.31□□□□□ -0.44
Crlf1Q9JM58 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Crlf1Q9JM58 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.31□□□□□ -0.44
Crlf1Q9JM58 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Crlf1Q9JM58 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Crlf1Q9JM58 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.31□□□□□ -0.44
Crlf1Q9JM58 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Crlf1Q9JM58 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Crlf1Q9JM58 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Crlf1Q9JM58 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Crlf1Q9JM58 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Crlf1Q9JM58 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Crlf1Q9JM58 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Crlf1Q9JM58 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Crlf1Q9JM58 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.31□□□□□ -0.44
Crlf1Q9JM58 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Crlf1Q9JM58 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Crlf1Q9JM58 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Crlf1Q9JM58 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Crlf1Q9JM58 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Crlf1Q9JM58 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC12.31□□□□□ -0.44
Crlf1Q9JM58 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Crlf1Q9JM58 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Crlf1Q9JM58 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Crlf1Q9JM58 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Crlf1Q9JM58 Gm19439-201ENSMUST00000198195 2273 ntBASIC12.31□□□□□ -0.44
Crlf1Q9JM58 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Crlf1Q9JM58 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Crlf1Q9JM58 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Crlf1Q9JM58 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Crlf1Q9JM58 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Crlf1Q9JM58 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Crlf1Q9JM58 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Crlf1Q9JM58 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Crlf1Q9JM58 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Crlf1Q9JM58 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.3□□□□□ -0.44
Crlf1Q9JM58 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC12.3□□□□□ -0.44
Crlf1Q9JM58 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Crlf1Q9JM58 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms