Protein–RNA interactions for Protein: Q9JKB3

Ybx3, Y-box-binding protein 3, mousemouse

Known RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx3Q9JKB3 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ybx3Q9JKB3 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ybx3Q9JKB3 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ybx3Q9JKB3 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ybx3Q9JKB3 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.9■□□□□ 0.78
Ybx3Q9JKB3 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ybx3Q9JKB3 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
Ybx3Q9JKB3 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Ybx3Q9JKB3 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Ybx3Q9JKB3 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ybx3Q9JKB3 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ybx3Q9JKB3 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ybx3Q9JKB3 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ybx3Q9JKB3 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ybx3Q9JKB3 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Ybx3Q9JKB3 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.9■□□□□ 0.78
Ybx3Q9JKB3 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ybx3Q9JKB3 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC19.9■□□□□ 0.78
Ybx3Q9JKB3 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ybx3Q9JKB3 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ybx3Q9JKB3 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ybx3Q9JKB3 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Ybx3Q9JKB3 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Ybx3Q9JKB3 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Ybx3Q9JKB3 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Ybx3Q9JKB3 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.89■□□□□ 0.77
Ybx3Q9JKB3 Ldha-ps-201ENSMUST00000119390 995 ntBASIC19.89■□□□□ 0.77
Ybx3Q9JKB3 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ybx3Q9JKB3 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ybx3Q9JKB3 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.89■□□□□ 0.77
Ybx3Q9JKB3 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ybx3Q9JKB3 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ybx3Q9JKB3 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ybx3Q9JKB3 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ybx3Q9JKB3 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ybx3Q9JKB3 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
Ybx3Q9JKB3 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ybx3Q9JKB3 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC19.88■□□□□ 0.77
Ybx3Q9JKB3 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC19.88■□□□□ 0.77
Ybx3Q9JKB3 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ybx3Q9JKB3 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC19.88■□□□□ 0.77
Ybx3Q9JKB3 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ybx3Q9JKB3 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ybx3Q9JKB3 Gm13392-201ENSMUST00000117708 150 ntBASIC19.88■□□□□ 0.77
Ybx3Q9JKB3 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ybx3Q9JKB3 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Ybx3Q9JKB3 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC19.88■□□□□ 0.77
Ybx3Q9JKB3 Gm27701-201ENSMUST00000184498 110 ntBASIC19.88■□□□□ 0.77
Ybx3Q9JKB3 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ybx3Q9JKB3 Gm19220-201ENSMUST00000222682 803 ntBASIC19.88■□□□□ 0.77
Ybx3Q9JKB3 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ybx3Q9JKB3 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ybx3Q9JKB3 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ybx3Q9JKB3 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ybx3Q9JKB3 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ybx3Q9JKB3 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ybx3Q9JKB3 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ybx3Q9JKB3 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.88■□□□□ 0.77
Ybx3Q9JKB3 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ybx3Q9JKB3 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ybx3Q9JKB3 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ybx3Q9JKB3 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ybx3Q9JKB3 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
Ybx3Q9JKB3 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ybx3Q9JKB3 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC19.87■□□□□ 0.77
Ybx3Q9JKB3 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC19.87■□□□□ 0.77
Ybx3Q9JKB3 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC19.87■□□□□ 0.77
Ybx3Q9JKB3 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC19.87■□□□□ 0.77
Ybx3Q9JKB3 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC19.87■□□□□ 0.77
Ybx3Q9JKB3 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ybx3Q9JKB3 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ybx3Q9JKB3 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
Ybx3Q9JKB3 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ybx3Q9JKB3 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.87■□□□□ 0.77
Ybx3Q9JKB3 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ybx3Q9JKB3 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ybx3Q9JKB3 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ybx3Q9JKB3 Gm8839-201ENSMUST00000121279 1645 ntBASIC19.87■□□□□ 0.77
Ybx3Q9JKB3 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ybx3Q9JKB3 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ybx3Q9JKB3 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC19.86■□□□□ 0.77
Ybx3Q9JKB3 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ybx3Q9JKB3 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Ybx3Q9JKB3 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.86■□□□□ 0.77
Ybx3Q9JKB3 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC19.86■□□□□ 0.77
Ybx3Q9JKB3 Gm5303-201ENSMUST00000117943 1252 ntBASIC19.86■□□□□ 0.77
Ybx3Q9JKB3 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ybx3Q9JKB3 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ybx3Q9JKB3 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC19.86■□□□□ 0.77
Ybx3Q9JKB3 CT009510.1-201ENSMUST00000227972 270 ntBASIC19.86■□□□□ 0.77
Ybx3Q9JKB3 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC19.86■□□□□ 0.77
Ybx3Q9JKB3 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ybx3Q9JKB3 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ybx3Q9JKB3 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ybx3Q9JKB3 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ybx3Q9JKB3 AC115863.1-201ENSMUST00000214815 1813 ntBASIC19.86■□□□□ 0.77
Ybx3Q9JKB3 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ybx3Q9JKB3 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Ybx3Q9JKB3 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ybx3Q9JKB3 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms