Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC13.15□□□□□ -0.3
Rbfox1Q9JJ43 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Rbfox1Q9JJ43 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.15□□□□□ -0.3
Rbfox1Q9JJ43 Gm44454-201ENSMUST00000198541 138 ntBASIC13.15□□□□□ -0.3
Rbfox1Q9JJ43 Gm17808-201ENSMUST00000200859 894 ntBASIC13.15□□□□□ -0.3
Rbfox1Q9JJ43 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.15□□□□□ -0.3
Rbfox1Q9JJ43 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rbfox1Q9JJ43 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Rbfox1Q9JJ43 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rbfox1Q9JJ43 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rbfox1Q9JJ43 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Rbfox1Q9JJ43 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.15□□□□□ -0.3
Rbfox1Q9JJ43 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rbfox1Q9JJ43 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Rbfox1Q9JJ43 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rbfox1Q9JJ43 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.15□□□□□ -0.3
Rbfox1Q9JJ43 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rbfox1Q9JJ43 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.15□□□□□ -0.3
Rbfox1Q9JJ43 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rbfox1Q9JJ43 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rbfox1Q9JJ43 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.14□□□□□ -0.31
Rbfox1Q9JJ43 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rbfox1Q9JJ43 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Rbfox1Q9JJ43 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rbfox1Q9JJ43 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rbfox1Q9JJ43 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rbfox1Q9JJ43 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rbfox1Q9JJ43 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Rbfox1Q9JJ43 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.14□□□□□ -0.31
Rbfox1Q9JJ43 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rbfox1Q9JJ43 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rbfox1Q9JJ43 Mir3081-201ENSMUST00000175305 84 ntBASIC13.14□□□□□ -0.31
Rbfox1Q9JJ43 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Rbfox1Q9JJ43 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rbfox1Q9JJ43 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rbfox1Q9JJ43 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Rbfox1Q9JJ43 Gm19164-201ENSMUST00000210667 640 ntBASIC13.14□□□□□ -0.31
Rbfox1Q9JJ43 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rbfox1Q9JJ43 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC13.14□□□□□ -0.31
Rbfox1Q9JJ43 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rbfox1Q9JJ43 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rbfox1Q9JJ43 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rbfox1Q9JJ43 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rbfox1Q9JJ43 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rbfox1Q9JJ43 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rbfox1Q9JJ43 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rbfox1Q9JJ43 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rbfox1Q9JJ43 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Rbfox1Q9JJ43 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rbfox1Q9JJ43 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rbfox1Q9JJ43 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rbfox1Q9JJ43 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rbfox1Q9JJ43 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rbfox1Q9JJ43 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rbfox1Q9JJ43 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rbfox1Q9JJ43 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rbfox1Q9JJ43 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.13□□□□□ -0.31
Rbfox1Q9JJ43 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rbfox1Q9JJ43 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Rbfox1Q9JJ43 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13.13□□□□□ -0.31
Rbfox1Q9JJ43 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rbfox1Q9JJ43 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rbfox1Q9JJ43 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rbfox1Q9JJ43 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Rbfox1Q9JJ43 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rbfox1Q9JJ43 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rbfox1Q9JJ43 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Rbfox1Q9JJ43 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rbfox1Q9JJ43 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.13□□□□□ -0.31
Rbfox1Q9JJ43 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rbfox1Q9JJ43 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rbfox1Q9JJ43 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rbfox1Q9JJ43 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rbfox1Q9JJ43 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rbfox1Q9JJ43 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rbfox1Q9JJ43 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rbfox1Q9JJ43 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rbfox1Q9JJ43 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rbfox1Q9JJ43 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rbfox1Q9JJ43 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rbfox1Q9JJ43 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rbfox1Q9JJ43 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Rbfox1Q9JJ43 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rbfox1Q9JJ43 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rbfox1Q9JJ43 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rbfox1Q9JJ43 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Rbfox1Q9JJ43 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Rbfox1Q9JJ43 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rbfox1Q9JJ43 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rbfox1Q9JJ43 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC13.12□□□□□ -0.31
Rbfox1Q9JJ43 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.12□□□□□ -0.31
Rbfox1Q9JJ43 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rbfox1Q9JJ43 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rbfox1Q9JJ43 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC13.12□□□□□ -0.31
Rbfox1Q9JJ43 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rbfox1Q9JJ43 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Rbfox1Q9JJ43 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rbfox1Q9JJ43 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.12□□□□□ -0.31
Rbfox1Q9JJ43 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Rbfox1Q9JJ43 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms